RNA–Protein interactions for RNA: ENST00000620788.1

PHLDB1-227, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 2

Gene PHLDB1, Length 5,898 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-227ENST00000620788 MYT1Q01538 1121 aa18.61■□□□□ 0.57
PHLDB1-227ENST00000620788 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.57
PHLDB1-227ENST00000620788 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
PHLDB1-227ENST00000620788 CENPBP07199 599 aaPredicted RBP17.02■□□□□ 0.31
PHLDB1-227ENST00000620788 ERICH6Q7L0X2 663 aa16.99■□□□□ 0.31
PHLDB1-227ENST00000620788 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
PHLDB1-227ENST00000620788 PCGF6Q9BYE7 350 aa16.61■□□□□ 0.25
PHLDB1-227ENST00000620788 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
PHLDB1-227ENST00000620788 HRCP23327 699 aa16.54■□□□□ 0.24
PHLDB1-227ENST00000620788 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
PHLDB1-227ENST00000620788 NEFLP07196 543 aa16.12■□□□□ 0.17
PHLDB1-227ENST00000620788 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
PHLDB1-227ENST00000620788 PPARGC1BQ86YN6 1023 aaKnown RBP16.03■□□□□ 0.16
PHLDB1-227ENST00000620788 GTF3C3Q9Y5Q9 886 aa16.02■□□□□ 0.16
PHLDB1-227ENST00000620788 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
PHLDB1-227ENST00000620788 BCL11AQ9H165 835 aa15.94■□□□□ 0.14
PHLDB1-227ENST00000620788 GLIPR1L2Q4G1C9 344 aa15.91■□□□□ 0.14
PHLDB1-227ENST00000620788 EIF5BO60841 1220 aaKnown RBP15.84■□□□□ 0.13
PHLDB1-227ENST00000620788 ACIN1Q9UKV3 1341 aaKnown RBP15.82■□□□□ 0.12
PHLDB1-227ENST00000620788 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
PHLDB1-227ENST00000620788 MYT1LQ9UL68 1186 aa15.68■□□□□ 0.1
PHLDB1-227ENST00000620788 TRIM26Q12899 539 aaPredicted RBP15.66■□□□□ 0.1
PHLDB1-227ENST00000620788 DAXXQ9UER7 740 aaPredicted RBP15.62■□□□□ 0.09
PHLDB1-227ENST00000620788 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
PHLDB1-227ENST00000620788 ANP32EQ9BTT0 268 aa15.59■□□□□ 0.09
PHLDB1-227ENST00000620788 DIEXFQ68CQ4 756 aaKnown RBP15.58■□□□□ 0.09
PHLDB1-227ENST00000620788 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.07
PHLDB1-227ENST00000620788 PRKCSHP14314 528 aaPredicted RBP15.51■□□□□ 0.07
PHLDB1-227ENST00000620788 RANGAP1P46060 587 aaPredicted RBP15.48■□□□□ 0.07
PHLDB1-227ENST00000620788 NEUROD1Q13562 356 aa15.35■□□□□ 0.05
PHLDB1-227ENST00000620788 BCANQ96GW7 911 aa15.35■□□□□ 0.05
PHLDB1-227ENST00000620788 CDK11AQ9UQ88 783 aaPredicted RBP15.34■□□□□ 0.05
PHLDB1-227ENST00000620788 NISCHQ9Y2I1 1504 aa15.33■□□□□ 0.05
PHLDB1-227ENST00000620788 DCAF8L2P0C7V8 631 aa15.33■□□□□ 0.05
PHLDB1-227ENST00000620788 CLSPNQ9HAW4 1339 aa15.33■□□□□ 0.04
PHLDB1-227ENST00000620788 ZNF316A6NFI3 1004 aaPredicted RBP15.33■□□□□ 0.04
PHLDB1-227ENST00000620788 APLP2Q06481 763 aa15.3■□□□□ 0.04
PHLDB1-227ENST00000620788 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.03
PHLDB1-227ENST00000620788 FAM9AQ8IZU1 332 aaPredicted RBP15.2■□□□□ 0.02
PHLDB1-227ENST00000620788 ANP32AP39687 249 aaKnown RBP15.12■□□□□ 0.01
PHLDB1-227ENST00000620788 NBR1Q14596 966 aa15.1■□□□□ 0.01
PHLDB1-227ENST00000620788 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
PHLDB1-227ENST00000620788 RTN4Q9NQC3 1192 aaKnown RBP15.01□□□□□ -0.01
PHLDB1-227ENST00000620788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
PHLDB1-227ENST00000620788 PODXL2Q9NZ53 605 aa14.97□□□□□ -0.01
PHLDB1-227ENST00000620788 TNNT2P45379 298 aaPredicted RBP14.93□□□□□ -0.02
PHLDB1-227ENST00000620788 DEKP35659 375 aaKnown RBP14.92□□□□□ -0.02
PHLDB1-227ENST00000620788 FKBP8Q14318 412 aa14.91□□□□□ -0.02
PHLDB1-227ENST00000620788 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.91□□□□□ -0.02
PHLDB1-227ENST00000620788 ERICH6BQ5W0A0 696 aa14.91□□□□□ -0.02
PHLDB1-227ENST00000620788 PKNOX2Q96KN3 472 aa14.87□□□□□ -0.03
PHLDB1-227ENST00000620788 ZBTB47Q9UFB7 747 aaPredicted RBP14.87□□□□□ -0.03
PHLDB1-227ENST00000620788 CCDC136Q96JN2 1154 aa14.84□□□□□ -0.03
PHLDB1-227ENST00000620788 CDK11BP21127 795 aaKnown RBP14.84□□□□□ -0.03
PHLDB1-227ENST00000620788 NCLP19338 710 aaKnown RBP14.81□□□□□ -0.04
PHLDB1-227ENST00000620788 NPM2Q86SE8 214 aaKnown RBP14.79□□□□□ -0.04
PHLDB1-227ENST00000620788 NEFMP07197 916 aa14.77□□□□□ -0.05
PHLDB1-227ENST00000620788 LOC105371045A0A1W2PR82 267 aa14.76□□□□□ -0.05
PHLDB1-227ENST00000620788 ANP32BQ92688 251 aaKnown RBP14.76□□□□□ -0.05
PHLDB1-227ENST00000620788 NAP1L5Q96NT1 182 aaPredicted RBP14.76□□□□□ -0.05
PHLDB1-227ENST00000620788 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
PHLDB1-227ENST00000620788 VSIG10Q8N0Z9 540 aa14.73□□□□□ -0.05
PHLDB1-227ENST00000620788 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
PHLDB1-227ENST00000620788 ANO8Q9HCE9 1232 aaPredicted RBP14.67□□□□□ -0.06
PHLDB1-227ENST00000620788 A0A0U1RQG5 324 aaPredicted RBP14.67□□□□□ -0.06
PHLDB1-227ENST00000620788 TRIM44Q96DX7 344 aaPredicted RBP14.66□□□□□ -0.06
PHLDB1-227ENST00000620788 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
PHLDB1-227ENST00000620788 ITGAEP38570 1179 aa14.6□□□□□ -0.07
PHLDB1-227ENST00000620788 ANP32CO43423 234 aa14.59□□□□□ -0.07
PHLDB1-227ENST00000620788 SUPT16HQ9Y5B9 1047 aaKnown RBP14.59□□□□□ -0.07
PHLDB1-227ENST00000620788 NOP58Q9Y2X3 529 aaKnown RBP14.58□□□□□ -0.07
PHLDB1-227ENST00000620788 ZNF326Q5BKZ1 582 aaKnown RBP14.57□□□□□ -0.08
PHLDB1-227ENST00000620788 AMER1Q5JTC6 1135 aaPredicted RBP14.57□□□□□ -0.08
PHLDB1-227ENST00000620788 HNRNPUL2Q1KMD3 747 aaKnown RBP14.56□□□□□ -0.08
PHLDB1-227ENST00000620788 RSPH6AQ9H0K4 717 aa14.56□□□□□ -0.08
PHLDB1-227ENST00000620788 PPM1GO15355 546 aaPredicted RBP14.55□□□□□ -0.08
PHLDB1-227ENST00000620788 RBM19Q9Y4C8 960 aaKnown RBP14.55□□□□□ -0.08
PHLDB1-227ENST00000620788 ARXQ96QS3 562 aa14.55□□□□□ -0.08
PHLDB1-227ENST00000620788 TSHZ2Q9NRE2 1034 aa14.54□□□□□ -0.08
PHLDB1-227ENST00000620788 POLR3GLQ9BT43 218 aa14.54□□□□□ -0.08
PHLDB1-227ENST00000620788 HSP90AA2PQ14568 343 aaPredicted RBP14.51□□□□□ -0.09
PHLDB1-227ENST00000620788 MIER1Q8N108 512 aa14.5□□□□□ -0.09
PHLDB1-227ENST00000620788 UBE2Q2Q8WVN8 375 aa14.5□□□□□ -0.09
PHLDB1-227ENST00000620788 UBTFP17480 764 aaKnown RBP14.46□□□□□ -0.09
PHLDB1-227ENST00000620788 CNGB1Q14028 1251 aaPredicted RBP14.44□□□□□ -0.1
PHLDB1-227ENST00000620788 SALL2Q9Y467 1007 aaPredicted RBP14.42□□□□□ -0.1
PHLDB1-227ENST00000620788 DDRGK1Q96HY6 314 aa14.42□□□□□ -0.1
PHLDB1-227ENST00000620788 PNNQ9H307 717 aaKnown RBP14.39□□□□□ -0.11
PHLDB1-227ENST00000620788 PDE4CQ08493 712 aa14.39□□□□□ -0.11
PHLDB1-227ENST00000620788 DCAF1Q9Y4B6 1507 aa14.38□□□□□ -0.11
PHLDB1-227ENST00000620788 TIMELESSQ9UNS1 1208 aa14.38□□□□□ -0.11
PHLDB1-227ENST00000620788 LAS1LQ9Y4W2 734 aaKnown RBP14.37□□□□□ -0.11
PHLDB1-227ENST00000620788 ARID4BQ4LE39 1312 aaPredicted RBP14.35□□□□□ -0.11
PHLDB1-227ENST00000620788 PTMSP20962 102 aa14.3□□□□□ -0.12
PHLDB1-227ENST00000620788 HNRNPUQ00839 825 aaKnown RBP eCLIP14.29□□□□□ -0.12
PHLDB1-227ENST00000620788 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
PHLDB1-227ENST00000620788 TRIM52Q96A61 297 aa14.28□□□□□ -0.12
PHLDB1-227ENST00000620788 UPF2Q9HAU5 1272 aaKnown RBP14.28□□□□□ -0.12
PHLDB1-227ENST00000620788 IRX6P78412 446 aaPredicted RBP14.27□□□□□ -0.12
PHLDB1-227ENST00000620788 TNNT3P45378 269 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms