Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SPG7Q9UQ90 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SPG7Q9UQ90 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SPG7Q9UQ90 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SPG7Q9UQ90 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SPG7Q9UQ90 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPG7Q9UQ90 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC26.28■■□□□ 1.8
SPG7Q9UQ90 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPG7Q9UQ90 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPG7Q9UQ90 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
SPG7Q9UQ90 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPG7Q9UQ90 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPG7Q9UQ90 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
SPG7Q9UQ90 AC079598.2-202ENST00000546624 1451 ntBASIC26.26■■□□□ 1.79
SPG7Q9UQ90 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPG7Q9UQ90 UNC93B2-201ENST00000285383 730 ntBASIC26.26■■□□□ 1.79
SPG7Q9UQ90 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC26.26■■□□□ 1.79
SPG7Q9UQ90 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SPG7Q9UQ90 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC26.26■■□□□ 1.79
SPG7Q9UQ90 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC26.26■■□□□ 1.79
SPG7Q9UQ90 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPG7Q9UQ90 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPG7Q9UQ90 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 KRT8P17-201ENST00000453110 1448 ntBASIC26.25■■□□□ 1.79
SPG7Q9UQ90 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SPG7Q9UQ90 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 AL121603.2-201ENST00000557373 2117 ntBASIC26.24■■□□□ 1.79
SPG7Q9UQ90 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 TMPOP1-202ENST00000424642 1267 ntBASIC26.24■■□□□ 1.79
SPG7Q9UQ90 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 KSR1P1-201ENST00000446298 240 ntBASIC26.24■■□□□ 1.79
SPG7Q9UQ90 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 AC145285.6-201ENST00000604632 637 ntBASIC26.24■■□□□ 1.79
SPG7Q9UQ90 AP000525.1-201ENST00000608286 694 ntBASIC26.24■■□□□ 1.79
SPG7Q9UQ90 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPG7Q9UQ90 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 NIFKP9-201ENST00000419265 221 ntBASIC26.23■■□□□ 1.79
SPG7Q9UQ90 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 GLDC-219ENST00000640208 420 ntTSL 2 BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 H19-201ENST00000411754 1788 ntTSL 5 BASIC26.23■■□□□ 1.79
SPG7Q9UQ90 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 MIR6786-201ENST00000616843 113 ntBASIC26.22■■□□□ 1.79
SPG7Q9UQ90 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 CR392000.1-201ENST00000624770 1228 ntBASIC26.22■■□□□ 1.79
SPG7Q9UQ90 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 KRT8P9-201ENST00000558927 1449 ntBASIC26.22■■□□□ 1.79
SPG7Q9UQ90 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPG7Q9UQ90 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SPG7Q9UQ90 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms