Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD3Q9UBI1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.59■□□□□ 0.41
COMMD3Q9UBI1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
COMMD3Q9UBI1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.58■□□□□ 0.41
COMMD3Q9UBI1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
COMMD3Q9UBI1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.58■□□□□ 0.41
COMMD3Q9UBI1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COMMD3Q9UBI1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.58■□□□□ 0.41
COMMD3Q9UBI1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 SRD5A1P1-201ENST00000442297 786 ntBASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
COMMD3Q9UBI1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 AC005332.8-201ENST00000622750 2735 ntBASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COMMD3Q9UBI1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 UNC93B8-201ENST00000511903 705 ntBASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 MIR2861-201ENST00000636310 90 ntBASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 AC061975.6-201ENST00000579045 1553 ntBASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD3Q9UBI1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD3Q9UBI1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms