Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL35Q9NZE8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
MRPL35Q9NZE8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL35Q9NZE8 TREX1-205ENST00000625293 1783 ntBASIC14.21□□□□□ -0.13
MRPL35Q9NZE8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL35Q9NZE8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL35Q9NZE8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
MRPL35Q9NZE8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MRPL35Q9NZE8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MRPL35Q9NZE8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.21□□□□□ -0.14
MRPL35Q9NZE8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MRPL35Q9NZE8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.21□□□□□ -0.14
MRPL35Q9NZE8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 AL138781.2-201ENST00000617896 1843 ntBASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL35Q9NZE8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 AC006455.2-201ENST00000429931 906 ntBASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL35Q9NZE8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 OR2I1P-207ENST00000453522 948 ntBASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL35Q9NZE8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 MIR3181-201ENST00000578512 73 ntBASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
MRPL35Q9NZE8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms