Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AC004408.2-201ENST00000623613 2777 ntBASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 AC012414.1-201ENST00000556676 535 ntBASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 AL355001.2-201ENST00000620617 1191 ntBASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
C12orf4Q9NQ89 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 MIR939-201ENST00000401314 82 ntBASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 AF213884.3-201ENST00000563833 479 ntBASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 BCL2-203ENST00000589955 5011 ntBASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C12orf4Q9NQ89 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 POU5F1P4-201ENST00000413175 1085 ntBASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 AC008175.2-201ENST00000612840 297 ntBASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C12orf4Q9NQ89 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 AL354811.1-201ENST00000610286 706 ntBASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 AL162377.1-201ENST00000618844 1793 ntBASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 AL032819.2-201ENST00000624543 2162 ntBASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C12orf4Q9NQ89 PCDHAC2-203ENST00000615316 3011 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms