Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRD9Q9H8M2 AL049796.1-201ENST00000565336 1766 ntBASIC20.74■□□□□ 0.91
BRD9Q9H8M2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 FAM197Y1-201ENST00000421178 764 ntBASIC20.74■□□□□ 0.91
BRD9Q9H8M2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRD9Q9H8M2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 AL121906.2-201ENST00000621597 723 ntBASIC20.73■□□□□ 0.91
BRD9Q9H8M2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD9Q9H8M2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 TMPOP1-202ENST00000424642 1267 ntBASIC20.72■□□□□ 0.91
BRD9Q9H8M2 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 AC073195.1-201ENST00000607241 877 ntBASIC20.72■□□□□ 0.91
BRD9Q9H8M2 AC004264.1-201ENST00000608354 794 ntBASIC20.72■□□□□ 0.91
BRD9Q9H8M2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.72■□□□□ 0.91
BRD9Q9H8M2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 AF106564.1-201ENST00000607058 2553 ntBASIC20.71■□□□□ 0.91
BRD9Q9H8M2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 AC027702.1-201ENST00000563810 1770 ntBASIC20.71■□□□□ 0.91
BRD9Q9H8M2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD9Q9H8M2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
BRD9Q9H8M2 KRT8P36-201ENST00000489121 1440 ntBASIC20.7■□□□□ 0.9
BRD9Q9H8M2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms