Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.61■□□□□ 0.89
HDAC11Q96DB2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.61■□□□□ 0.89
HDAC11Q96DB2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.61■□□□□ 0.89
HDAC11Q96DB2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC11Q96DB2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC11Q96DB2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.61■□□□□ 0.89
HDAC11Q96DB2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.61■□□□□ 0.89
HDAC11Q96DB2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC11Q96DB2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 BX276092.2-201ENST00000417668 665 ntBASIC20.6■□□□□ 0.89
HDAC11Q96DB2 GUSBP6-202ENST00000438529 1198 ntBASIC20.6■□□□□ 0.89
HDAC11Q96DB2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 C2orf69P4-201ENST00000565394 541 ntBASIC20.6■□□□□ 0.89
HDAC11Q96DB2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.6■□□□□ 0.89
HDAC11Q96DB2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 AL391422.3-201ENST00000603791 2761 ntBASIC20.6■□□□□ 0.89
HDAC11Q96DB2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC11Q96DB2 BX119927.1-201ENST00000636596 1552 ntBASIC20.59■□□□□ 0.89
HDAC11Q96DB2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HDAC11Q96DB2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC11Q96DB2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC11Q96DB2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC11Q96DB2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC11Q96DB2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC11Q96DB2 MIPEPP3-201ENST00000412105 444 ntBASIC20.58■□□□□ 0.89
HDAC11Q96DB2 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.58■□□□□ 0.89
HDAC11Q96DB2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC11Q96DB2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HDAC11Q96DB2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDAC11Q96DB2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.58■□□□□ 0.88
HDAC11Q96DB2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC11Q96DB2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC11Q96DB2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC11Q96DB2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HDAC11Q96DB2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 TCF3P1-201ENST00000423021 1937 ntBASIC20.57■□□□□ 0.88
HDAC11Q96DB2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 GPX1P1-201ENST00000388829 606 ntBASIC20.57■□□□□ 0.88
HDAC11Q96DB2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 TSPY6P-201ENST00000448518 926 ntBASIC20.57■□□□□ 0.88
HDAC11Q96DB2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.57■□□□□ 0.88
HDAC11Q96DB2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HDAC11Q96DB2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 AC112907.3-201ENST00000577781 2400 ntBASIC20.56■□□□□ 0.88
HDAC11Q96DB2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HDAC11Q96DB2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms