Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.03■□□□□ 0.64
LRRC58Q96CX6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC58Q96CX6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 MIR638-201ENST00000385237 100 ntBASIC19.02■□□□□ 0.64
LRRC58Q96CX6 MIR935-201ENST00000401179 91 ntBASIC19.02■□□□□ 0.64
LRRC58Q96CX6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC58Q96CX6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.02■□□□□ 0.63
LRRC58Q96CX6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.02■□□□□ 0.63
LRRC58Q96CX6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC58Q96CX6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
LRRC58Q96CX6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC58Q96CX6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LRRC58Q96CX6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19■□□□□ 0.63
LRRC58Q96CX6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19■□□□□ 0.63
LRRC58Q96CX6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
LRRC58Q96CX6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19■□□□□ 0.63
LRRC58Q96CX6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19■□□□□ 0.63
LRRC58Q96CX6 AL139246.5-201ENST00000606645 996 ntBASIC19■□□□□ 0.63
LRRC58Q96CX6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19■□□□□ 0.63
LRRC58Q96CX6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19■□□□□ 0.63
LRRC58Q96CX6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19■□□□□ 0.63
LRRC58Q96CX6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19■□□□□ 0.63
LRRC58Q96CX6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LRRC58Q96CX6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LRRC58Q96CX6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
LRRC58Q96CX6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19■□□□□ 0.63
LRRC58Q96CX6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
LRRC58Q96CX6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19■□□□□ 0.63
LRRC58Q96CX6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 GOLGA2P11-201ENST00000562660 1621 ntBASIC19■□□□□ 0.63
LRRC58Q96CX6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC58Q96CX6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 AC009237.14-201ENST00000609975 1594 ntBASIC18.99■□□□□ 0.63
LRRC58Q96CX6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 AC027612.3-201ENST00000413684 1047 ntBASIC18.99■□□□□ 0.63
LRRC58Q96CX6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC58Q96CX6 SLC7A5P1-201ENST00000568957 537 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms