Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.37■■□□□ 1.81
RAPGEF4Q8WZA2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF4Q8WZA2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF4Q8WZA2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF4Q8WZA2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
RAPGEF4Q8WZA2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF4Q8WZA2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF4Q8WZA2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF4Q8WZA2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAPGEF4Q8WZA2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.37■■□□□ 1.81
RAPGEF4Q8WZA2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 AC116562.2-201ENST00000507042 360 ntBASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 AL121603.2-201ENST00000557373 2117 ntBASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.36■■□□□ 1.81
RAPGEF4Q8WZA2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 KRT16P1-201ENST00000399124 1418 ntBASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.35■■□□□ 1.81
RAPGEF4Q8WZA2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 KRT8P17-201ENST00000453110 1448 ntBASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RAPGEF4Q8WZA2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 H19-201ENST00000411754 1788 ntTSL 5 BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 AL390955.1-201ENST00000428694 934 ntBASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 KRT18P35-201ENST00000510488 1269 ntBASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RAPGEF4Q8WZA2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RAPGEF4Q8WZA2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC26.33■■□□□ 1.8
RAPGEF4Q8WZA2 LINC01568-207ENST00000641790 1380 ntBASIC26.33■■□□□ 1.8
RAPGEF4Q8WZA2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 AC005521.1-201ENST00000393351 872 ntBASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 FITM1-202ENST00000559294 800 ntBASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RAPGEF4Q8WZA2 EP400NL-214ENST00000641289 2402 ntBASIC26.31■■□□□ 1.8
RAPGEF4Q8WZA2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms