Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF3Q8TEJ3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF3Q8TEJ3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.87■■□□□ 1.41
SH3RF3Q8TEJ3 AC113410.3-201ENST00000623366 203 ntBASIC23.87■■□□□ 1.41
SH3RF3Q8TEJ3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF3Q8TEJ3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF3Q8TEJ3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 AC092720.2-201ENST00000602388 1665 ntBASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.86■■□□□ 1.41
SH3RF3Q8TEJ3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.85■■□□□ 1.41
SH3RF3Q8TEJ3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 AL135905.2-201ENST00000584934 1404 ntBASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SH3RF3Q8TEJ3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 KRT16P5-201ENST00000455284 522 ntBASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
SH3RF3Q8TEJ3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.83■■□□□ 1.4
SH3RF3Q8TEJ3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
SH3RF3Q8TEJ3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SH3RF3Q8TEJ3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
SH3RF3Q8TEJ3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 HTR7P1-201ENST00000538670 1336 ntBASIC23.82■■□□□ 1.4
SH3RF3Q8TEJ3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SH3RF3Q8TEJ3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms