Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC023632.3-201ENST00000521633 145 ntBASIC21.07■□□□□ 0.96
SHKBP1Q8TBC3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.07■□□□□ 0.96
SHKBP1Q8TBC3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.07■□□□□ 0.96
SHKBP1Q8TBC3 AL049637.2-201ENST00000641778 930 ntBASIC21.07■□□□□ 0.96
SHKBP1Q8TBC3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHKBP1Q8TBC3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHKBP1Q8TBC3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHKBP1Q8TBC3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SHKBP1Q8TBC3 AF106564.1-201ENST00000607058 2553 ntBASIC21.07■□□□□ 0.96
SHKBP1Q8TBC3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SHKBP1Q8TBC3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.06■□□□□ 0.96
SHKBP1Q8TBC3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 AL049796.1-201ENST00000565336 1766 ntBASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHKBP1Q8TBC3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 AC092667.1-201ENST00000434301 2586 ntBASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 AC124283.5-201ENST00000624661 1809 ntBASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 AC121338.2-201ENST00000622535 1744 ntBASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHKBP1Q8TBC3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 ECEL1P3-201ENST00000427961 737 ntBASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 PRKY-204ENST00000533551 1019 ntBASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 RARRES2P10-201ENST00000564312 460 ntBASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 AC113410.3-201ENST00000623366 203 ntBASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 AL135905.2-201ENST00000584934 1404 ntBASIC21.03■□□□□ 0.96
SHKBP1Q8TBC3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms