Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00173Q6ZV60 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 AC135050.7-201ENST00000624508 2218 ntBASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 OR2I1P-207ENST00000453522 948 ntBASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 AL117332.1-201ENST00000622628 974 ntBASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 BX005040.4-201ENST00000637145 1518 ntBASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 AC011484.1-201ENST00000377652 1995 ntBASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 CROCCP3-202ENST00000420820 1947 ntBASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00173Q6ZV60 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 AP006587.3-201ENST00000525742 1516 ntBASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 AC079598.2-202ENST00000546624 1451 ntBASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00173Q6ZV60 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 AL033527.3-201ENST00000566366 1196 ntBASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 AC010997.5-201ENST00000609182 354 ntBASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 AC012354.3-201ENST00000623734 483 ntBASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC00173Q6ZV60 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LINC00173Q6ZV60 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms