Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM12Q3MHD2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 KRT18P20-201ENST00000548986 1279 ntBASIC19.45■□□□□ 0.7
LSM12Q3MHD2 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM12Q3MHD2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM12Q3MHD2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 KRT18P14-201ENST00000534205 1250 ntBASIC19.43■□□□□ 0.7
LSM12Q3MHD2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 CCDC92B-201ENST00000575506 885 ntBASIC19.43■□□□□ 0.7
LSM12Q3MHD2 AC243732.1-201ENST00000612648 864 ntBASIC19.43■□□□□ 0.7
LSM12Q3MHD2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM12Q3MHD2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 FAM21FP-204ENST00000608637 956 ntBASIC19.42■□□□□ 0.7
LSM12Q3MHD2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 RBM17P2-201ENST00000616397 1405 ntBASIC19.42■□□□□ 0.7
LSM12Q3MHD2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM12Q3MHD2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms