Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERFP50548 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.27■□□□□ 0.68
ERFP50548 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 AL049812.1-201ENST00000432563 2267 ntBASIC19.27■□□□□ 0.68
ERFP50548 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ERFP50548 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.27■□□□□ 0.68
ERFP50548 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ERFP50548 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.27■□□□□ 0.68
ERFP50548 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.27■□□□□ 0.68
ERFP50548 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.27■□□□□ 0.68
ERFP50548 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.27■□□□□ 0.68
ERFP50548 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.27■□□□□ 0.68
ERFP50548 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.27■□□□□ 0.68
ERFP50548 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.27■□□□□ 0.68
ERFP50548 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.27■□□□□ 0.68
ERFP50548 AC131212.1-201ENST00000613771 668 ntBASIC19.27■□□□□ 0.68
ERFP50548 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.27■□□□□ 0.68
ERFP50548 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERFP50548 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
ERFP50548 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ERFP50548 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ERFP50548 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERFP50548 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERFP50548 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
ERFP50548 SYT6-210ENST00000641643 1587 ntBASIC19.27■□□□□ 0.67
ERFP50548 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
ERFP50548 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ERFP50548 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.27■□□□□ 0.67
ERFP50548 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERFP50548 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERFP50548 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERFP50548 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERFP50548 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.26■□□□□ 0.67
ERFP50548 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.26■□□□□ 0.67
ERFP50548 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERFP50548 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.26■□□□□ 0.67
ERFP50548 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.26■□□□□ 0.67
ERFP50548 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.26■□□□□ 0.67
ERFP50548 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
ERFP50548 AL512631.2-201ENST00000604634 923 ntBASIC19.26■□□□□ 0.67
ERFP50548 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.26■□□□□ 0.67
ERFP50548 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERFP50548 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
ERFP50548 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERFP50548 TREX1-205ENST00000625293 1783 ntBASIC19.26■□□□□ 0.67
ERFP50548 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.26■□□□□ 0.67
ERFP50548 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.25■□□□□ 0.67
ERFP50548 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ERFP50548 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.25■□□□□ 0.67
ERFP50548 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ERFP50548 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
ERFP50548 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.25■□□□□ 0.67
ERFP50548 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ERFP50548 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.25■□□□□ 0.67
ERFP50548 AP005435.1-201ENST00000529293 1178 ntBASIC19.25■□□□□ 0.67
ERFP50548 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.25■□□□□ 0.67
ERFP50548 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ERFP50548 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERFP50548 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.25■□□□□ 0.67
ERFP50548 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ERFP50548 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.24■□□□□ 0.67
ERFP50548 AC104581.1-202ENST00000635932 2618 ntBASIC19.24■□□□□ 0.67
ERFP50548 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ERFP50548 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERFP50548 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERFP50548 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERFP50548 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERFP50548 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ERFP50548 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.24■□□□□ 0.67
ERFP50548 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERFP50548 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERFP50548 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms