Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RXRGP48443 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 SNORA78-201ENST00000459373 127 ntBASIC20.01■□□□□ 0.79
RXRGP48443 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.01■□□□□ 0.79
RXRGP48443 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.01■□□□□ 0.79
RXRGP48443 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RXRGP48443 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.01■□□□□ 0.79
RXRGP48443 AL356652.1-201ENST00000615962 565 ntBASIC20.01■□□□□ 0.79
RXRGP48443 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.01■□□□□ 0.79
RXRGP48443 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.01■□□□□ 0.79
RXRGP48443 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRGP48443 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.01■□□□□ 0.79
RXRGP48443 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RXRGP48443 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20■□□□□ 0.79
RXRGP48443 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RXRGP48443 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20■□□□□ 0.79
RXRGP48443 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20■□□□□ 0.79
RXRGP48443 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RXRGP48443 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20■□□□□ 0.79
RXRGP48443 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20■□□□□ 0.79
RXRGP48443 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
RXRGP48443 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RXRGP48443 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20■□□□□ 0.79
RXRGP48443 AC233702.5-201ENST00000584107 538 ntBASIC20■□□□□ 0.79
RXRGP48443 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20■□□□□ 0.79
RXRGP48443 AC124016.1-201ENST00000609552 612 ntBASIC20■□□□□ 0.79
RXRGP48443 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RXRGP48443 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20■□□□□ 0.79
RXRGP48443 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RXRGP48443 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20■□□□□ 0.79
RXRGP48443 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRGP48443 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
RXRGP48443 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
RXRGP48443 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.99■□□□□ 0.79
RXRGP48443 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.99■□□□□ 0.79
RXRGP48443 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.99■□□□□ 0.79
RXRGP48443 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.99■□□□□ 0.79
RXRGP48443 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.99■□□□□ 0.79
RXRGP48443 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.99■□□□□ 0.79
RXRGP48443 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RXRGP48443 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RXRGP48443 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.99■□□□□ 0.79
RXRGP48443 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RXRGP48443 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
RXRGP48443 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.99■□□□□ 0.79
RXRGP48443 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RXRGP48443 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.99■□□□□ 0.79
RXRGP48443 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RXRGP48443 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRGP48443 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RXRGP48443 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRGP48443 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RXRGP48443 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RXRGP48443 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRGP48443 RPS2P55-201ENST00000397318 883 ntBASIC19.98■□□□□ 0.79
RXRGP48443 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRGP48443 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRGP48443 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RXRGP48443 AC107956.1-201ENST00000494359 873 ntBASIC19.98■□□□□ 0.79
RXRGP48443 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.98■□□□□ 0.79
RXRGP48443 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms