Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 SNQ2YDR011W 4506 nt3.16□□□□□ -1.9
RTG3P38165 COA6YMR244C-A 315 nt3.16□□□□□ -1.9
RTG3P38165 NUP157YER105C 4176 nt3.15□□□□□ -1.9
RTG3P38165 ALY2YJL084C 3141 nt3.14□□□□□ -1.91
RTG3P38165 SGS1YMR190C 4344 nt3.14□□□□□ -1.91
RTG3P38165 TIM9YEL020W-A 264 nt3.13□□□□□ -1.91
RTG3P38165 TRS130YMR218C 3309 nt3.12□□□□□ -1.91
RTG3P38165 MYO2YOR326W 4725 nt3.12□□□□□ -1.91
RTG3P38165 YBL005W-BYBL005W-B 5268 nt3.09□□□□□ -1.91
RTG3P38165 SEC10YLR166C 2616 nt3.08□□□□□ -1.92
RTG3P38165 YLR149C-AYLR149C-A 87 nt3.08□□□□□ -1.92
RTG3P38165 TRL1YJL087C 2484 nt3.08□□□□□ -1.92
RTG3P38165 YPR097WYPR097W 3222 nt3.07□□□□□ -1.92
RTG3P38165 PAN2YGL094C 3348 nt3.07□□□□□ -1.92
RTG3P38165 IRE1YHR079C 3348 nt3.07□□□□□ -1.92
RTG3P38165 UFD4YKL010C 4452 nt3.07□□□□□ -1.92
RTG3P38165 RGA1YOR127W 3024 nt3.07□□□□□ -1.92
RTG3P38165 UBP3YER151C 2739 nt3.06□□□□□ -1.92
RTG3P38165 RPS29AYLR388W 171 nt3.05□□□□□ -1.92
RTG3P38165 PDR11YIL013C 4236 nt3.04□□□□□ -1.92
RTG3P38165 YKL225WYKL225W 348 nt3.04□□□□□ -1.92
RTG3P38165 SSD1YDR293C 3753 nt3.04□□□□□ -1.92
RTG3P38165 MMS4YBR098W 2076 nt3.04□□□□□ -1.92
RTG3P38165 SYH1YPL105C 2550 nt3.03□□□□□ -1.92
RTG3P38165 SPO24YPR036W-A 204 nt3.03□□□□□ -1.92
RTG3P38165 TAO3YIL129C 7131 nt3.03□□□□□ -1.93
RTG3P38165 WAR1YML076C 2835 nt3.02□□□□□ -1.93
RTG3P38165 YDL073WYDL073W 2955 nt3.02□□□□□ -1.93
RTG3P38165 YEF3YLR249W 3135 nt3.02□□□□□ -1.93
RTG3P38165 TOF1YNL273W 3717 nt3.02□□□□□ -1.93
RTG3P38165 UBR1YGR184C 5853 nt3.02□□□□□ -1.93
RTG3P38165 NUT1YGL151W 3399 nt3□□□□□ -1.93
RTG3P38165 PET309YLR067C 2898 nt3□□□□□ -1.93
RTG3P38165 TOM1YDR457W 9807 nt3□□□□□ -1.93
RTG3P38165 YDR098C-BYDR098C-B 5268 nt2.99□□□□□ -1.93
RTG3P38165 YDR210C-DYDR210C-D 5268 nt2.99□□□□□ -1.93
RTG3P38165 YDR316W-BYDR316W-B 5268 nt2.99□□□□□ -1.93
RTG3P38165 YDR365W-BYDR365W-B 5268 nt2.99□□□□□ -1.93
RTG3P38165 YER138CYER138C 5268 nt2.99□□□□□ -1.93
RTG3P38165 YER160CYER160C 5268 nt2.99□□□□□ -1.93
RTG3P38165 YGR038C-BYGR038C-B 5268 nt2.99□□□□□ -1.93
RTG3P38165 YGR161C-DYGR161C-D 5268 nt2.99□□□□□ -1.93
RTG3P38165 YJR027WYJR027W 5268 nt2.99□□□□□ -1.93
RTG3P38165 YLR157C-BYLR157C-B 5268 nt2.99□□□□□ -1.93
RTG3P38165 YML039WYML039W 5268 nt2.99□□□□□ -1.93
RTG3P38165 YML045WYML045W 5268 nt2.99□□□□□ -1.93
RTG3P38165 YMR050CYMR050C 5268 nt2.99□□□□□ -1.93
RTG3P38165 YOL103W-BYOL103W-B 5268 nt2.99□□□□□ -1.93
RTG3P38165 YBR012W-BYBR012W-B 5271 nt2.99□□□□□ -1.93
RTG3P38165 YOR142W-BYOR142W-B 5268 nt2.99□□□□□ -1.93
RTG3P38165 YPL257W-BYPL257W-B 5268 nt2.99□□□□□ -1.93
RTG3P38165 YPR158W-BYPR158W-B 5271 nt2.99□□□□□ -1.93
RTG3P38165 CYR1YJL005W 6081 nt2.99□□□□□ -1.93
RTG3P38165 AZF1YOR113W 2745 nt2.99□□□□□ -1.93
RTG3P38165 INO80YGL150C 4470 nt2.99□□□□□ -1.93
RTG3P38165 GEA1YJR031C 4227 nt2.99□□□□□ -1.93
RTG3P38165 NUM1YDR150W 8247 nt2.99□□□□□ -1.93
RTG3P38165 SCD5YOR329C 2619 nt2.98□□□□□ -1.93
RTG3P38165 RPL26BYGR034W 384 nt2.98□□□□□ -1.93
RTG3P38165 ROM2YLR371W 4071 nt2.98□□□□□ -1.93
RTG3P38165 SFB2YNL049C 2631 nt2.97□□□□□ -1.93
RTG3P38165 TDA9YML081W 3756 nt2.97□□□□□ -1.93
RTG3P38165 LCL1YPL056C 306 nt2.97□□□□□ -1.93
RTG3P38165 YBR200W-AYBR200W-A 165 nt2.97□□□□□ -1.93
RTG3P38165 GYP5YPL249C 2685 nt2.96□□□□□ -1.93
RTG3P38165 SMC1YFL008W 3678 nt2.96□□□□□ -1.94
RTG3P38165 TFC3YAL001C 3483 nt2.94□□□□□ -1.94
RTG3P38165 YOR343W-BYOR343W-B 5313 nt2.94□□□□□ -1.94
RTG3P38165 YAR009CYAR009C 3591 nt2.93□□□□□ -1.94
RTG3P38165 CHC1YGL206C 4962 nt2.93□□□□□ -1.94
RTG3P38165 snR190snR190 190 nt2.92□□□□□ -1.94
RTG3P38165 HIR3YJR140C 4947 nt2.9□□□□□ -1.94
RTG3P38165 PIK1YNL267W 3201 nt2.9□□□□□ -1.94
RTG3P38165 SLH1YGR271W 5904 nt2.9□□□□□ -1.95
RTG3P38165 FAR11YNL127W 2862 nt2.9□□□□□ -1.95
RTG3P38165 SAP1YER047C 2694 nt2.89□□□□□ -1.95
RTG3P38165 VPS13YLL040C 9435 nt2.89□□□□□ -1.95
RTG3P38165 NNF2YGR089W 2811 nt2.89□□□□□ -1.95
RTG3P38165 BNR1YIL159W 4128 nt2.89□□□□□ -1.95
RTG3P38165 FLO11YIR019C 4104 nt2.87□□□□□ -1.95
RTG3P38165 SRB8YCR081W 4284 nt2.87□□□□□ -1.95
RTG3P38165 UTP22YGR090W 3714 nt2.87□□□□□ -1.95
RTG3P38165 GIP3YPL137C 3831 nt2.86□□□□□ -1.95
RTG3P38165 DNF1YER166W 4716 nt2.86□□□□□ -1.95
RTG3P38165 UTP21YLR409C 2820 nt2.86□□□□□ -1.95
RTG3P38165 YHR086W-AYHR086W-A 162 nt2.84□□□□□ -1.95
RTG3P38165 YJL052C-AYJL052C-A 120 nt2.84□□□□□ -1.95
RTG3P38165 tD(GUC)QtD(GUC)Q 75 nt2.83□□□□□ -1.96
RTG3P38165 CHS1YNL192W 3396 nt2.83□□□□□ -1.96
RTG3P38165 YLR299C-AYLR299C-A 93 nt2.82□□□□□ -1.96
RTG3P38165 TOP2YNL088W 4287 nt2.82□□□□□ -1.96
RTG3P38165 MGA2YIR033W 3342 nt2.81□□□□□ -1.96
RTG3P38165 RAD50YNL250W 3939 nt2.81□□□□□ -1.96
RTG3P38165 RAV1YJR033C 4074 nt2.8□□□□□ -1.96
RTG3P38165 EMC5YIL027C 426 nt2.8□□□□□ -1.96
RTG3P38165 MSH6YDR097C 3729 nt2.8□□□□□ -1.96
RTG3P38165 RTT101YJL047C 2529 nt2.8□□□□□ -1.96
RTG3P38165 NUP170YBL079W 4509 nt2.8□□□□□ -1.96
RTG3P38165 YDR209CYDR209C 414 nt2.78□□□□□ -1.96
RTG3P38165 REV3YPL167C 4515 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 34.7 ms