Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC005829.2-201ENST00000571422 1056 ntBASIC20.52■□□□□ 0.88
MT-CO1P00395 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-CO1P00395 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-CO1P00395 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MT-CO1P00395 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MT-CO1P00395 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.52■□□□□ 0.87
MT-CO1P00395 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MT-CO1P00395 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MT-CO1P00395 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MT-CO1P00395 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-CO1P00395 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-CO1P00395 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-CO1P00395 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MT-CO1P00395 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-CO1P00395 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-CO1P00395 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-CO1P00395 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-CO1P00395 AC008687.6-201ENST00000596318 630 ntBASIC20.51■□□□□ 0.87
MT-CO1P00395 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.51■□□□□ 0.87
MT-CO1P00395 AC073648.6-201ENST00000641589 218 ntBASIC20.51■□□□□ 0.87
MT-CO1P00395 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-CO1P00395 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MT-CO1P00395 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.51■□□□□ 0.87
MT-CO1P00395 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-CO1P00395 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-CO1P00395 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-CO1P00395 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-CO1P00395 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
MT-CO1P00395 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.5■□□□□ 0.87
MT-CO1P00395 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MT-CO1P00395 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-CO1P00395 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
MT-CO1P00395 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.5■□□□□ 0.87
MT-CO1P00395 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MT-CO1P00395 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
MT-CO1P00395 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-CO1P00395 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.5■□□□□ 0.87
MT-CO1P00395 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-CO1P00395 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.5■□□□□ 0.87
MT-CO1P00395 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.5■□□□□ 0.87
MT-CO1P00395 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-CO1P00395 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
MT-CO1P00395 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-CO1P00395 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-CO1P00395 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-CO1P00395 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-CO1P00395 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.5■□□□□ 0.87
MT-CO1P00395 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-CO1P00395 PTBP1P-201ENST00000554374 1601 ntBASIC20.49■□□□□ 0.87
MT-CO1P00395 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.49■□□□□ 0.87
MT-CO1P00395 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MT-CO1P00395 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MT-CO1P00395 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.49■□□□□ 0.87
MT-CO1P00395 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
MT-CO1P00395 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-CO1P00395 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-CO1P00395 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.49■□□□□ 0.87
MT-CO1P00395 AC233263.1-201ENST00000578059 224 ntBASIC20.49■□□□□ 0.87
MT-CO1P00395 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.49■□□□□ 0.87
MT-CO1P00395 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MT-CO1P00395 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
MT-CO1P00395 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.49■□□□□ 0.87
MT-CO1P00395 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
MT-CO1P00395 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MT-CO1P00395 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
MT-CO1P00395 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MT-CO1P00395 LINC01006-201ENST00000333319 2292 ntBASIC20.48■□□□□ 0.87
MT-CO1P00395 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-CO1P00395 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
MT-CO1P00395 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.48■□□□□ 0.87
MT-CO1P00395 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.48■□□□□ 0.87
MT-CO1P00395 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.48■□□□□ 0.87
MT-CO1P00395 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
MT-CO1P00395 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
MT-CO1P00395 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-CO1P00395 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-CO1P00395 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-CO1P00395 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-CO1P00395 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.48■□□□□ 0.87
MT-CO1P00395 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-CO1P00395 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MT-CO1P00395 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
MT-CO1P00395 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.47■□□□□ 0.87
MT-CO1P00395 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.47■□□□□ 0.87
MT-CO1P00395 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MT-CO1P00395 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms