Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSNA1O43805 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSNA1O43805 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSNA1O43805 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
SSNA1O43805 AL138781.2-201ENST00000617896 1843 ntBASIC17.07■□□□□ 0.32
SSNA1O43805 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSNA1O43805 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSNA1O43805 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSNA1O43805 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.07■□□□□ 0.32
SSNA1O43805 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.07■□□□□ 0.32
SSNA1O43805 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.07■□□□□ 0.32
SSNA1O43805 AC018470.1-201ENST00000624790 3129 ntBASIC17.07■□□□□ 0.32
SSNA1O43805 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSNA1O43805 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.07■□□□□ 0.32
SSNA1O43805 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.07■□□□□ 0.32
SSNA1O43805 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSNA1O43805 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.07■□□□□ 0.32
SSNA1O43805 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SSNA1O43805 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSNA1O43805 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSNA1O43805 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSNA1O43805 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSNA1O43805 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSNA1O43805 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.06■□□□□ 0.32
SSNA1O43805 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.06■□□□□ 0.32
SSNA1O43805 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.06■□□□□ 0.32
SSNA1O43805 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SSNA1O43805 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SSNA1O43805 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.06■□□□□ 0.32
SSNA1O43805 DUX4L18-201ENST00000553347 1267 ntBASIC17.06■□□□□ 0.32
SSNA1O43805 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SSNA1O43805 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.06■□□□□ 0.32
SSNA1O43805 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SSNA1O43805 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.06■□□□□ 0.32
SSNA1O43805 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSNA1O43805 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.06■□□□□ 0.32
SSNA1O43805 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SSNA1O43805 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.05■□□□□ 0.32
SSNA1O43805 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.05■□□□□ 0.32
SSNA1O43805 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.05■□□□□ 0.32
SSNA1O43805 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.05■□□□□ 0.32
SSNA1O43805 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.05■□□□□ 0.32
SSNA1O43805 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SSNA1O43805 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSNA1O43805 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.04■□□□□ 0.32
SSNA1O43805 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.04■□□□□ 0.32
SSNA1O43805 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.04■□□□□ 0.32
SSNA1O43805 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SSNA1O43805 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SSNA1O43805 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.04■□□□□ 0.32
SSNA1O43805 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SSNA1O43805 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
SSNA1O43805 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSNA1O43805 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSNA1O43805 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSNA1O43805 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SSNA1O43805 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.03■□□□□ 0.32
SSNA1O43805 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSNA1O43805 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSNA1O43805 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms