Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.36■□□□□ 0.85
KDELR3O43731 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KDELR3O43731 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KDELR3O43731 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KDELR3O43731 KRT17P3-201ENST00000420566 1262 ntBASIC20.36■□□□□ 0.85
KDELR3O43731 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KDELR3O43731 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.36■□□□□ 0.85
KDELR3O43731 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.36■□□□□ 0.85
KDELR3O43731 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.36■□□□□ 0.85
KDELR3O43731 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KDELR3O43731 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KDELR3O43731 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
KDELR3O43731 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.36■□□□□ 0.85
KDELR3O43731 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KDELR3O43731 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.36■□□□□ 0.85
KDELR3O43731 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
KDELR3O43731 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KDELR3O43731 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KDELR3O43731 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KDELR3O43731 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
KDELR3O43731 BX119927.1-201ENST00000636596 1552 ntBASIC20.35■□□□□ 0.85
KDELR3O43731 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
KDELR3O43731 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KDELR3O43731 RPS2P52-201ENST00000469610 820 ntBASIC20.35■□□□□ 0.85
KDELR3O43731 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.35■□□□□ 0.85
KDELR3O43731 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.35■□□□□ 0.85
KDELR3O43731 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.35■□□□□ 0.85
KDELR3O43731 AC006058.3-201ENST00000606217 1069 ntBASIC20.35■□□□□ 0.85
KDELR3O43731 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.35■□□□□ 0.85
KDELR3O43731 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KDELR3O43731 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
KDELR3O43731 LINC01521-201ENST00000504184 1943 ntBASIC20.35■□□□□ 0.85
KDELR3O43731 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KDELR3O43731 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.35■□□□□ 0.85
KDELR3O43731 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KDELR3O43731 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
KDELR3O43731 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
KDELR3O43731 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.35■□□□□ 0.85
KDELR3O43731 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KDELR3O43731 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.34■□□□□ 0.85
KDELR3O43731 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDELR3O43731 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KDELR3O43731 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KDELR3O43731 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.34■□□□□ 0.85
KDELR3O43731 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDELR3O43731 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
KDELR3O43731 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDELR3O43731 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KDELR3O43731 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.34■□□□□ 0.85
KDELR3O43731 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.34■□□□□ 0.85
KDELR3O43731 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KDELR3O43731 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.34■□□□□ 0.85
KDELR3O43731 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.33■□□□□ 0.85
KDELR3O43731 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.33■□□□□ 0.85
KDELR3O43731 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.33■□□□□ 0.85
KDELR3O43731 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
KDELR3O43731 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
KDELR3O43731 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KDELR3O43731 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.33■□□□□ 0.85
KDELR3O43731 ITM2C-210ENST00000620962 501 ntBASIC20.33■□□□□ 0.85
KDELR3O43731 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDELR3O43731 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDELR3O43731 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
KDELR3O43731 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
KDELR3O43731 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
KDELR3O43731 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.33■□□□□ 0.84
KDELR3O43731 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KDELR3O43731 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.33■□□□□ 0.84
KDELR3O43731 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDELR3O43731 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDELR3O43731 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.32■□□□□ 0.84
KDELR3O43731 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
KDELR3O43731 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDELR3O43731 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.32■□□□□ 0.84
KDELR3O43731 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.32■□□□□ 0.84
KDELR3O43731 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDELR3O43731 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDELR3O43731 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.32■□□□□ 0.84
KDELR3O43731 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.32■□□□□ 0.84
KDELR3O43731 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.32■□□□□ 0.84
KDELR3O43731 AC128676.1-201ENST00000454392 318 ntBASIC20.32■□□□□ 0.84
KDELR3O43731 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KDELR3O43731 AC073648.6-201ENST00000641589 218 ntBASIC20.32■□□□□ 0.84
KDELR3O43731 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.32■□□□□ 0.84
KDELR3O43731 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.32■□□□□ 0.84
KDELR3O43731 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KDELR3O43731 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.31■□□□□ 0.84
KDELR3O43731 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.31■□□□□ 0.84
KDELR3O43731 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KDELR3O43731 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms