Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 CCDC92B-201ENST00000575506 885 ntBASIC18.5■□□□□ 0.55
TNFRSF11BO00300 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TNFRSF11BO00300 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 AC105265.2-201ENST00000467189 838 ntBASIC18.49■□□□□ 0.55
TNFRSF11BO00300 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 AC243732.1-201ENST00000612648 864 ntBASIC18.49■□□□□ 0.55
TNFRSF11BO00300 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.49■□□□□ 0.55
TNFRSF11BO00300 AC120498.9-201ENST00000339021 3867 ntBASIC18.49■□□□□ 0.55
TNFRSF11BO00300 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 SUDS3P1-201ENST00000505831 966 ntBASIC18.48■□□□□ 0.55
TNFRSF11BO00300 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 KRT18P20-201ENST00000548986 1279 ntBASIC18.48■□□□□ 0.55
TNFRSF11BO00300 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 RBM17P2-201ENST00000616397 1405 ntBASIC18.48■□□□□ 0.55
TNFRSF11BO00300 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TNFRSF11BO00300 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 AC004408.2-201ENST00000623613 2777 ntBASIC18.47■□□□□ 0.55
TNFRSF11BO00300 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.47■□□□□ 0.55
TNFRSF11BO00300 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF11BO00300 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.46■□□□□ 0.55
TNFRSF11BO00300 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms