Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CTAGE9A4FU28 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.35■■□□□ 1.01
CTAGE9A4FU28 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.35■■□□□ 1.01
CTAGE9A4FU28 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CTAGE9A4FU28 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTAGE9A4FU28 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.35■■□□□ 1.01
CTAGE9A4FU28 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTAGE9A4FU28 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CTAGE9A4FU28 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTAGE9A4FU28 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 NEFHP1-201ENST00000412845 2629 ntBASIC21.34■■□□□ 1.01
CTAGE9A4FU28 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CTAGE9A4FU28 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.33■■□□□ 1.01
CTAGE9A4FU28 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.33■■□□□ 1
CTAGE9A4FU28 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.33■■□□□ 1
CTAGE9A4FU28 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CTAGE9A4FU28 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.33■■□□□ 1
CTAGE9A4FU28 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.33■■□□□ 1
CTAGE9A4FU28 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.33■■□□□ 1
CTAGE9A4FU28 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CTAGE9A4FU28 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.32■■□□□ 1
CTAGE9A4FU28 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CTAGE9A4FU28 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.32■■□□□ 1
CTAGE9A4FU28 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CTAGE9A4FU28 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CTAGE9A4FU28 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.32■■□□□ 1
CTAGE9A4FU28 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.32■■□□□ 1
CTAGE9A4FU28 AC106739.1-201ENST00000617035 715 ntBASIC21.32■■□□□ 1
CTAGE9A4FU28 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.32■■□□□ 1
CTAGE9A4FU28 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.32■■□□□ 1
CTAGE9A4FU28 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.32■■□□□ 1
CTAGE9A4FU28 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.32■■□□□ 1
CTAGE9A4FU28 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.32■■□□□ 1
CTAGE9A4FU28 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.32■■□□□ 1
CTAGE9A4FU28 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.31■■□□□ 1
CTAGE9A4FU28 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTAGE9A4FU28 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTAGE9A4FU28 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTAGE9A4FU28 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.31■■□□□ 1
CTAGE9A4FU28 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.31■■□□□ 1
CTAGE9A4FU28 AC099791.1-201ENST00000416440 715 ntBASIC21.31■■□□□ 1
CTAGE9A4FU28 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.31■■□□□ 1
CTAGE9A4FU28 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CTAGE9A4FU28 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTAGE9A4FU28 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.31■■□□□ 1
CTAGE9A4FU28 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.31■■□□□ 1
CTAGE9A4FU28 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTAGE9A4FU28 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTAGE9A4FU28 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.31■■□□□ 1
CTAGE9A4FU28 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTAGE9A4FU28 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTAGE9A4FU28 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CTAGE9A4FU28 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTAGE9A4FU28 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CTAGE9A4FU28 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms