Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 AL032819.2-201ENST00000624543 2162 ntBASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 AL031848.2-201ENST00000607670 837 ntBASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-1A0A0B4J245 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 AC004987.1-201ENST00000428627 508 ntBASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 AP004607.4-201ENST00000530158 1459 ntBASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV12-1A0A0B4J245 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 AL390961.4-201ENST00000623958 2535 ntBASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV12-1A0A0B4J245 CROCCP3-202ENST00000420820 1947 ntBASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 AC005332.8-201ENST00000622750 2735 ntBASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV12-1A0A0B4J245 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms