Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GPC6Q9Y625 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GPC6Q9Y625 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.93■□□□□ 0.62
GPC6Q9Y625 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
GPC6Q9Y625 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GPC6Q9Y625 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.93■□□□□ 0.62
GPC6Q9Y625 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.93■□□□□ 0.62
GPC6Q9Y625 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC6Q9Y625 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC6Q9Y625 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.93■□□□□ 0.62
GPC6Q9Y625 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GPC6Q9Y625 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
GPC6Q9Y625 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.93■□□□□ 0.62
GPC6Q9Y625 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 AC022517.1-201ENST00000592429 346 ntBASIC18.92■□□□□ 0.62
GPC6Q9Y625 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 AC112907.3-201ENST00000577781 2400 ntBASIC18.92■□□□□ 0.62
GPC6Q9Y625 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
GPC6Q9Y625 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GPC6Q9Y625 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
GPC6Q9Y625 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.91■□□□□ 0.62
GPC6Q9Y625 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.91■□□□□ 0.62
GPC6Q9Y625 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 AC006015.1-201ENST00000429970 570 ntBASIC18.91■□□□□ 0.62
GPC6Q9Y625 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
GPC6Q9Y625 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.91■□□□□ 0.62
GPC6Q9Y625 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.91■□□□□ 0.62
GPC6Q9Y625 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.91■□□□□ 0.62
GPC6Q9Y625 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GPC6Q9Y625 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.91■□□□□ 0.62
GPC6Q9Y625 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC6Q9Y625 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC6Q9Y625 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 PCDHAC2-203ENST00000615316 3011 ntBASIC18.9■□□□□ 0.62
GPC6Q9Y625 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC6Q9Y625 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GPC6Q9Y625 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
GPC6Q9Y625 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GPC6Q9Y625 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC6Q9Y625 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms