Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42EP3Q9UKI2 AC005229.4-201ENST00000610085 2198 ntBASIC16.75■□□□□ 0.27
CDC42EP3Q9UKI2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42EP3Q9UKI2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.75■□□□□ 0.27
CDC42EP3Q9UKI2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42EP3Q9UKI2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 AC012306.2-201ENST00000609350 630 ntBASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 AC113410.3-201ENST00000623366 203 ntBASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.74■□□□□ 0.27
CDC42EP3Q9UKI2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 KRASP1-201ENST00000407852 552 ntBASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 TMPOP1-202ENST00000424642 1267 ntBASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 AC120498.8-201ENST00000614275 531 ntBASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC42EP3Q9UKI2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 AC244015.2-201ENST00000616358 1861 ntBASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 AL445228.2-201ENST00000605589 952 ntBASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42EP3Q9UKI2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42EP3Q9UKI2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42EP3Q9UKI2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42EP3Q9UKI2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.71■□□□□ 0.27
CDC42EP3Q9UKI2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDC42EP3Q9UKI2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42EP3Q9UKI2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms