Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 AL121832.2-201ENST00000610979 668 ntBASIC20.45■□□□□ 0.86
UBP1Q9NZI7 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.45■□□□□ 0.86
UBP1Q9NZI7 AL589743.5-201ENST00000616611 1050 ntBASIC20.45■□□□□ 0.86
UBP1Q9NZI7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBP1Q9NZI7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 AC090192.1-201ENST00000517740 490 ntBASIC20.43■□□□□ 0.86
UBP1Q9NZI7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBP1Q9NZI7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 NCF1B-203ENST00000435988 1254 ntBASIC20.42■□□□□ 0.86
UBP1Q9NZI7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.42■□□□□ 0.86
UBP1Q9NZI7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 MIPEPP3-201ENST00000412105 444 ntBASIC20.41■□□□□ 0.86
UBP1Q9NZI7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
UBP1Q9NZI7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms