Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.31■■□□□ 1.32
RBM28Q9NW13 PNMA6B-201ENST00000538162 1200 ntBASIC23.31■■□□□ 1.32
RBM28Q9NW13 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.31■■□□□ 1.32
RBM28Q9NW13 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
RBM28Q9NW13 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
RBM28Q9NW13 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.31■■□□□ 1.32
RBM28Q9NW13 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
RBM28Q9NW13 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RBM28Q9NW13 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RBM28Q9NW13 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.31■■□□□ 1.32
RBM28Q9NW13 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RBM28Q9NW13 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RBM28Q9NW13 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RBM28Q9NW13 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RBM28Q9NW13 BX119927.1-201ENST00000636596 1552 ntBASIC23.31■■□□□ 1.32
RBM28Q9NW13 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RBM28Q9NW13 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
RBM28Q9NW13 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RBM28Q9NW13 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RBM28Q9NW13 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RBM28Q9NW13 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RBM28Q9NW13 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RBM28Q9NW13 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.3■■□□□ 1.32
RBM28Q9NW13 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RBM28Q9NW13 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.29■■□□□ 1.32
RBM28Q9NW13 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RBM28Q9NW13 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
RBM28Q9NW13 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.29■■□□□ 1.32
RBM28Q9NW13 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.29■■□□□ 1.32
RBM28Q9NW13 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 KRT18P6-201ENST00000555540 1265 ntBASIC23.29■■□□□ 1.32
RBM28Q9NW13 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.29■■□□□ 1.32
RBM28Q9NW13 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.29■■□□□ 1.32
RBM28Q9NW13 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBM28Q9NW13 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RBM28Q9NW13 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RBM28Q9NW13 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RBM28Q9NW13 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 AC099778.1-201ENST00000568593 1911 ntBASIC23.28■■□□□ 1.32
RBM28Q9NW13 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RBM28Q9NW13 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RBM28Q9NW13 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RBM28Q9NW13 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RBM28Q9NW13 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RBM28Q9NW13 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RBM28Q9NW13 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RBM28Q9NW13 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.28■■□□□ 1.32
RBM28Q9NW13 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 KRT16P6-202ENST00000425692 1426 ntBASIC23.27■■□□□ 1.32
RBM28Q9NW13 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RBM28Q9NW13 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RBM28Q9NW13 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RBM28Q9NW13 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RBM28Q9NW13 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
RBM28Q9NW13 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
RBM28Q9NW13 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.26■■□□□ 1.31
RBM28Q9NW13 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RBM28Q9NW13 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
RBM28Q9NW13 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RBM28Q9NW13 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms