Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 AC027612.3-201ENST00000413684 1047 ntBASIC20.88■□□□□ 0.93
DDX47Q9H0S4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 AC243732.1-201ENST00000612648 864 ntBASIC20.88■□□□□ 0.93
DDX47Q9H0S4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX47Q9H0S4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX47Q9H0S4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 AC105265.2-201ENST00000467189 838 ntBASIC20.86■□□□□ 0.93
DDX47Q9H0S4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 FAM21FP-204ENST00000608637 956 ntBASIC20.86■□□□□ 0.93
DDX47Q9H0S4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX47Q9H0S4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 KRT18P20-201ENST00000548986 1279 ntBASIC20.85■□□□□ 0.93
DDX47Q9H0S4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX47Q9H0S4 LINC02228-203ENST00000641970 1355 ntBASIC20.85■□□□□ 0.93
DDX47Q9H0S4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX47Q9H0S4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms