Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-1Q9BYR8 RBM17P2-201ENST00000616397 1405 ntBASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 SUDS3P1-201ENST00000505831 966 ntBASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 AP001160.3-201ENST00000601484 763 ntBASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 AC104187.1-201ENST00000607510 612 ntBASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 AC243732.1-201ENST00000612648 864 ntBASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 AC110285.6-201ENST00000617652 491 ntBASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 AL358852.1-201ENST00000623174 1268 ntBASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-1Q9BYR8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-1Q9BYR8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms