Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 TERF1P1-201ENST00000311003 1181 ntBASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 NAPSB-206ENST00000562112 1266 ntBASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTFDC1Q9BY42 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 AL390955.1-201ENST00000428694 934 ntBASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 KRT18P22-201ENST00000402024 1347 ntBASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTFDC1Q9BY42 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 CR392000.1-201ENST00000624770 1228 ntBASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
RTFDC1Q9BY42 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTFDC1Q9BY42 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTFDC1Q9BY42 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTFDC1Q9BY42 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.5■■□□□ 1.51
RTFDC1Q9BY42 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RTFDC1Q9BY42 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTFDC1Q9BY42 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.5■■□□□ 1.51
RTFDC1Q9BY42 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 CRAT-202ENST00000393384 973 ntTSL 2 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 KRT18P57-201ENST00000443599 1254 ntBASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 KRT16P1-201ENST00000399124 1418 ntBASIC24.49■■□□□ 1.51
RTFDC1Q9BY42 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms