Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PKP2Q99959 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.86■□□□□ 0.61
PKP2Q99959 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PKP2Q99959 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.86■□□□□ 0.61
PKP2Q99959 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.86■□□□□ 0.61
PKP2Q99959 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP2Q99959 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.85■□□□□ 0.61
PKP2Q99959 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP2Q99959 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP2Q99959 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP2Q99959 AC133561.4-201ENST00000566112 224 ntBASIC18.85■□□□□ 0.61
PKP2Q99959 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.85■□□□□ 0.61
PKP2Q99959 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP2Q99959 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP2Q99959 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP2Q99959 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP2Q99959 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PKP2Q99959 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP2Q99959 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP2Q99959 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PKP2Q99959 AL032819.2-201ENST00000624543 2162 ntBASIC18.84■□□□□ 0.61
PKP2Q99959 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.84■□□□□ 0.61
PKP2Q99959 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP2Q99959 EEF1DP3-203ENST00000566025 782 ntBASIC18.84■□□□□ 0.61
PKP2Q99959 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.84■□□□□ 0.61
PKP2Q99959 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP2Q99959 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.84■□□□□ 0.61
PKP2Q99959 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP2Q99959 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP2Q99959 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PKP2Q99959 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP2Q99959 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PKP2Q99959 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PKP2Q99959 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PKP2Q99959 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP2Q99959 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP2Q99959 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP2Q99959 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP2Q99959 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.83■□□□□ 0.61
PKP2Q99959 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP2Q99959 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP2Q99959 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
PKP2Q99959 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PKP2Q99959 LINC01465-201ENST00000408887 1940 ntBASIC18.83■□□□□ 0.6
PKP2Q99959 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PKP2Q99959 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP2Q99959 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP2Q99959 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.83■□□□□ 0.6
PKP2Q99959 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.83■□□□□ 0.6
PKP2Q99959 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP2Q99959 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.83■□□□□ 0.6
PKP2Q99959 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PKP2Q99959 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP2Q99959 AL512631.2-201ENST00000604634 923 ntBASIC18.83■□□□□ 0.6
PKP2Q99959 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP2Q99959 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP2Q99959 RARRES2P11-201ENST00000635158 484 ntBASIC18.83■□□□□ 0.6
PKP2Q99959 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PKP2Q99959 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.83■□□□□ 0.6
PKP2Q99959 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP2Q99959 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.83■□□□□ 0.6
PKP2Q99959 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
PKP2Q99959 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PKP2Q99959 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP2Q99959 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PKP2Q99959 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PKP2Q99959 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PKP2Q99959 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PKP2Q99959 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP2Q99959 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PKP2Q99959 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PKP2Q99959 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PKP2Q99959 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PKP2Q99959 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PKP2Q99959 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.82■□□□□ 0.6
PKP2Q99959 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PKP2Q99959 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP2Q99959 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PKP2Q99959 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP2Q99959 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.82■□□□□ 0.6
PKP2Q99959 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.82■□□□□ 0.6
PKP2Q99959 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.82■□□□□ 0.6
PKP2Q99959 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PKP2Q99959 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.82■□□□□ 0.6
PKP2Q99959 AC053503.5-201ENST00000601508 636 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms