Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 AC018470.1-201ENST00000624790 3129 ntBASIC18.89■□□□□ 0.61
NR1H4Q96RI1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NR1H4Q96RI1 AL133373.2-201ENST00000623187 2828 ntBASIC18.88■□□□□ 0.61
NR1H4Q96RI1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 AC021242.3-201ENST00000607598 1377 ntBASIC18.88■□□□□ 0.61
NR1H4Q96RI1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 FZD10-202ENST00000539839 3282 ntBASIC18.88■□□□□ 0.61
NR1H4Q96RI1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.88■□□□□ 0.61
NR1H4Q96RI1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 AC011484.1-201ENST00000377652 1995 ntBASIC18.87■□□□□ 0.61
NR1H4Q96RI1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 CROCCP3-202ENST00000420820 1947 ntBASIC18.87■□□□□ 0.61
NR1H4Q96RI1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR1H4Q96RI1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 AC009113.1-201ENST00000570267 2443 ntBASIC18.86■□□□□ 0.61
NR1H4Q96RI1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NR1H4Q96RI1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.85■□□□□ 0.61
NR1H4Q96RI1 KRT125P-201ENST00000546827 989 ntBASIC18.85■□□□□ 0.61
NR1H4Q96RI1 MIR6722-201ENST00000617286 78 ntBASIC18.85■□□□□ 0.61
NR1H4Q96RI1 AC068587.7-201ENST00000641602 218 ntBASIC18.85■□□□□ 0.61
NR1H4Q96RI1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR1H4Q96RI1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR1H4Q96RI1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms