Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IL1Q8TBN0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 AP000974.1-201ENST00000623909 2387 ntBASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 AC024257.2-201ENST00000549699 147 ntBASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 BX119927.1-201ENST00000636596 1552 ntBASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB3IL1Q8TBN0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 AC027682.1-201ENST00000562846 899 ntBASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 AL691432.2-201ENST00000607222 2038 ntBASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IL1Q8TBN0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RAB3IL1Q8TBN0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB3IL1Q8TBN0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB3IL1Q8TBN0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IL1Q8TBN0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RAB3IL1Q8TBN0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms