Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC007322.3-201ENST00000426526 701 ntBASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRTM1Q86UE6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRTM1Q86UE6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
LRRTM1Q86UE6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 AC243732.1-201ENST00000612648 864 ntBASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRTM1Q86UE6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 Z82202.1-201ENST00000623446 1880 ntBASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 AP001160.3-201ENST00000601484 763 ntBASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 AC104187.1-201ENST00000607510 612 ntBASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 FAM21FP-204ENST00000608637 956 ntBASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 RBM17P2-201ENST00000616397 1405 ntBASIC17.38■□□□□ 0.37
LRRTM1Q86UE6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 AC110285.6-201ENST00000617652 491 ntBASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms