Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 AC106739.1-201ENST00000617035 715 ntBASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00242Q5T6M2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
LINC00242Q5T6M2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00242Q5T6M2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00242Q5T6M2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.71□□□□□ -0.22
LINC00242Q5T6M2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00242Q5T6M2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 MIR939-201ENST00000401314 82 ntBASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 AC091305.1-201ENST00000479476 895 ntBASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 AL355001.2-201ENST00000620617 1191 ntBASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 AL358852.1-201ENST00000623174 1268 ntBASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00242Q5T6M2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 AIRN-201ENST00000601203 4374 ntBASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 AC120498.9-201ENST00000339021 3867 ntBASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 AC096631.2-201ENST00000436136 790 ntBASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 AF213884.3-201ENST00000563833 479 ntBASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 Z82202.1-201ENST00000623446 1880 ntBASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00242Q5T6M2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 AC007322.3-201ENST00000426526 701 ntBASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 SLC7A5P2-201ENST00000553010 536 ntBASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 FAM21FP-204ENST00000608637 956 ntBASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00242Q5T6M2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms