Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.553e-7■□□□□ 10.8
EWSR1Q01844 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.76■□□□□ 0.911e-6■□□□□ 10.7
EWSR1Q01844 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.313e-13■□□□□ 10.7
EWSR1Q01844 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 314.04□□□□□ -0.163e-13■□□□□ 10.7
EWSR1Q01844 SRSF4-206ENST00000605204 1399 ntTSL 1 (best)14.03□□□□□ -0.163e-13■□□□□ 10.7
EWSR1Q01844 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.1■□□□□ 0.016e-7■□□□□ 10.7
EWSR1Q01844 SCAF8-204ENST00000461219 677 ntTSL 514.98□□□□□ -0.016e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.116e-7■□□□□ 10.7
EWSR1Q01844 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.126e-7■□□□□ 10.7
EWSR1Q01844 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.01□□□□□ -0.176e-7■□□□□ 10.7
EWSR1Q01844 FLNA-216ENST00000490936 5374 ntTSL 1 (best)13.97□□□□□ -0.176e-7■□□□□ 10.7
EWSR1Q01844 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.386e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-208ENST00000482467 710 ntTSL 512.4□□□□□ -0.426e-7■□□□□ 10.7
EWSR1Q01844 MVD-207ENST00000563463 543 ntTSL 311.82□□□□□ -0.525e-6■□□□□ 10.7
EWSR1Q01844 FLNA-206ENST00000420627 8225 ntTSL 511.54□□□□□ -0.566e-7■□□□□ 10.7
EWSR1Q01844 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.576e-7■□□□□ 10.7
EWSR1Q01844 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.596e-7■□□□□ 10.7
EWSR1Q01844 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.12□□□□□ -0.636e-7■□□□□ 10.7
EWSR1Q01844 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.676e-7■□□□□ 10.7
EWSR1Q01844 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.726e-7■□□□□ 10.7
EWSR1Q01844 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC10.32□□□□□ -0.766e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-211ENST00000498303 514 ntTSL 1 (best)10.31□□□□□ -0.766e-7■□□□□ 10.7
EWSR1Q01844 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC9.19□□□□□ -0.946e-7■□□□□ 10.7
EWSR1Q01844 SCAF8-205ENST00000464628 468 ntTSL 58.7□□□□□ -1.026e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC7.2□□□□□ -1.266e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-210ENST00000495966 820 ntTSL 35.52□□□□□ -1.536e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.566e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-205ENST00000467231 851 ntTSL 32.03□□□□□ -2.086e-7■□□□□ 10.7
EWSR1Q01844 MBD3-211ENST00000592965 568 ntTSL 417.15■□□□□ 0.341e-6■□□□□ 10.7
EWSR1Q01844 MBD3-204ENST00000585967 583 ntTSL 412.51□□□□□ -0.411e-6■□□□□ 10.7
EWSR1Q01844 CSNK1D-212ENST00000580061 578 ntTSL 312.29□□□□□ -0.441e-6■□□□□ 10.6
EWSR1Q01844 UBAC1-204ENST00000478485 773 ntTSL 217.65■□□□□ 0.428e-7■□□□□ 10.6
EWSR1Q01844 GATAD2A-209ENST00000448576 271 ntTSL 321.01■□□□□ 0.955e-7■□□□□ 10.6
EWSR1Q01844 GATAD2A-212ENST00000494516 640 ntTSL 214.93□□□□□ -0.025e-7■□□□□ 10.6
EWSR1Q01844 AC010327.5-201ENST00000586923 3061 ntBASIC12.78□□□□□ -0.365e-7■□□□□ 10.6
EWSR1Q01844 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.385e-7■□□□□ 10.6
EWSR1Q01844 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC9.61□□□□□ -0.875e-7■□□□□ 10.6
EWSR1Q01844 CR1L-203ENST00000508064 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.95e-7■□□□□ 10.6
EWSR1Q01844 CD46P1-201ENST00000441364 763 ntBASIC6.92□□□□□ -1.35e-7■□□□□ 10.6
EWSR1Q01844 CR1L-205ENST00000531844 663 ntTSL 26.8□□□□□ -1.325e-7■□□□□ 10.6
EWSR1Q01844 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)12.3□□□□□ -0.446e-7■□□□□ 10.6
EWSR1Q01844 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.596e-7■□□□□ 10.6
EWSR1Q01844 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.35□□□□□ -0.596e-7■□□□□ 10.6
EWSR1Q01844 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC10.01□□□□□ -0.816e-7■□□□□ 10.6
EWSR1Q01844 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.846e-7■□□□□ 10.5
EWSR1Q01844 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.242e-8■□□□□ 10.5
EWSR1Q01844 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.252e-8■□□□□ 10.5
EWSR1Q01844 NEK7-205ENST00000442588 519 ntTSL 512.56□□□□□ -0.42e-8■□□□□ 10.5
EWSR1Q01844 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.21□□□□□ -0.452e-8■□□□□ 10.5
EWSR1Q01844 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.42■□□□□ 0.383e-7■□□□□ 10.4
EWSR1Q01844 AC110285.2-202ENST00000608155 414 ntTSL 512.03□□□□□ -0.483e-7■□□□□ 10.4
EWSR1Q01844 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.694e-11■□□□□ 10.4
EWSR1Q01844 SEPT5-212ENST00000470814 2353 ntTSL 516.71■□□□□ 0.274e-11■□□□□ 10.4
EWSR1Q01844 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC10.66□□□□□ -0.77e-34■□□□□ 10.4
EWSR1Q01844 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.524e-6■□□□□ 10.4
EWSR1Q01844 CLN6-224ENST00000638076 2323 ntTSL 1 (best)18.14■□□□□ 0.494e-6■□□□□ 10.4
EWSR1Q01844 AC107871.1-203ENST00000637054 3238 ntTSL 514.62□□□□□ -0.074e-6■□□□□ 10.4
EWSR1Q01844 AC107871.1-201ENST00000637888 2941 ntTSL 514.5□□□□□ -0.094e-6■□□□□ 10.4
EWSR1Q01844 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.164e-6■□□□□ 10.4
EWSR1Q01844 UBAC1-206ENST00000489050 864 ntTSL 37.18□□□□□ -1.264e-7■□□□□ 10.4
EWSR1Q01844 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.061e-6■□□□□ 10.3
EWSR1Q01844 SCRIB-207ENST00000531942 421 ntTSL 216.22■□□□□ 0.191e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-207ENST00000525995 592 ntTSL 415.69■□□□□ 0.11e-6■□□□□ 10.3
EWSR1Q01844 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.081e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-203ENST00000524932 1286 ntTSL 515.32■□□□□ 0.041e-6■□□□□ 10.3
EWSR1Q01844 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.041e-6■□□□□ 10.3
EWSR1Q01844 DDB1-220ENST00000542337 558 ntTSL 314.86□□□□□ -0.031e-6■□□□□ 10.3
EWSR1Q01844 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.141e-6■□□□□ 10.3
EWSR1Q01844 GOLGA2-203ENST00000458730 704 ntTSL 513.8□□□□□ -0.21e-6■□□□□ 10.3
EWSR1Q01844 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.251e-6■□□□□ 10.3
EWSR1Q01844 CHTF18-206ENST00000461268 814 ntTSL 512.9□□□□□ -0.341e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-228ENST00000534246 523 ntTSL 211.88□□□□□ -0.511e-6■□□□□ 10.3
EWSR1Q01844 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.551e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-210ENST00000527419 571 ntTSL 511.39□□□□□ -0.591e-6■□□□□ 10.3
EWSR1Q01844 SLC39A7-204ENST00000463972 1410 ntTSL 210.94□□□□□ -0.661e-6■□□□□ 10.3
EWSR1Q01844 FAM118A-207ENST00000459849 695 ntTSL 310.68□□□□□ -0.71e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-216ENST00000530702 563 ntTSL 210.11□□□□□ -0.791e-6■□□□□ 10.3
EWSR1Q01844 CHTF18-212ENST00000493715 691 ntTSL 310.08□□□□□ -0.81e-6■□□□□ 10.3
EWSR1Q01844 AACSP1-201ENST00000503486 2822 ntTSL 1 (best) BASIC9.85□□□□□ -0.831e-6■□□□□ 10.3
EWSR1Q01844 DDB1-223ENST00000543658 571 ntTSL 49.28□□□□□ -0.921e-6■□□□□ 10.3
EWSR1Q01844 FAM118A-210ENST00000476754 675 ntTSL 39.23□□□□□ -0.931e-6■□□□□ 10.3
EWSR1Q01844 AACSP1-202ENST00000521412 1095 ntBASIC9.15□□□□□ -0.941e-6■□□□□ 10.3
EWSR1Q01844 FAM118A-209ENST00000476478 354 ntTSL 39.05□□□□□ -0.961e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-214ENST00000530211 591 ntTSL 28.85□□□□□ -0.991e-6■□□□□ 10.3
EWSR1Q01844 DDB1-221ENST00000543162 575 ntTSL 48.43□□□□□ -1.061e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-221ENST00000532082 1069 ntTSL 1 (best)8.39□□□□□ -1.071e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.111e-6■□□□□ 10.3
EWSR1Q01844 DDB1-222ENST00000543627 540 ntTSL 58.12□□□□□ -1.111e-6■□□□□ 10.3
EWSR1Q01844 DDB1-214ENST00000539426 805 ntTSL 38.11□□□□□ -1.111e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-219ENST00000531507 591 ntTSL 57.7□□□□□ -1.181e-6■□□□□ 10.3
EWSR1Q01844 DDB1-217ENST00000540166 3906 ntTSL 27.57□□□□□ -1.21e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-226ENST00000532570 573 ntTSL 57.39□□□□□ -1.231e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.281e-6■□□□□ 10.3
EWSR1Q01844 DDB1-208ENST00000537120 1215 ntTSL 26.17□□□□□ -1.421e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-206ENST00000525972 584 ntTSL 24.89□□□□□ -1.631e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-212ENST00000528562 601 ntTSL 44.07□□□□□ -1.761e-6■□□□□ 10.3
EWSR1Q01844 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.229e-7■□□□□ 10.2
EWSR1Q01844 OGFOD2-213ENST00000540324 1828 ntTSL 1 (best)16.1■□□□□ 0.179e-7■□□□□ 10.2
EWSR1Q01844 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.179e-7■□□□□ 10.2
EWSR1Q01844 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.72■□□□□ 0.119e-7■□□□□ 10.2
Retrieved 100 of 7,101 protein–RNA pairs in 207.3 ms