Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 pRNA.11-201ENST00000618423 90 ntBASIC15.91■□□□□ 0.14
IFNA1P01562 pRNA.13-201ENST00000619112 90 ntBASIC15.91■□□□□ 0.14
IFNA1P01562 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
IFNA1P01562 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.91■□□□□ 0.14
IFNA1P01562 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.91■□□□□ 0.14
IFNA1P01562 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.91■□□□□ 0.14
IFNA1P01562 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
IFNA1P01562 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.9■□□□□ 0.14
IFNA1P01562 CROCCP1-201ENST00000426910 5675 ntBASIC15.9■□□□□ 0.14
IFNA1P01562 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 AC093484.2-201ENST00000580996 2166 ntBASIC15.9■□□□□ 0.14
IFNA1P01562 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.9■□□□□ 0.14
IFNA1P01562 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.9■□□□□ 0.14
IFNA1P01562 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
IFNA1P01562 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
IFNA1P01562 MIR4508-201ENST00000584178 70 ntBASIC15.9■□□□□ 0.14
IFNA1P01562 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
IFNA1P01562 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.9■□□□□ 0.14
IFNA1P01562 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.9■□□□□ 0.14
IFNA1P01562 Z82202.1-201ENST00000623446 1880 ntBASIC15.9■□□□□ 0.14
IFNA1P01562 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
IFNA1P01562 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.9■□□□□ 0.14
IFNA1P01562 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFNA1P01562 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.89■□□□□ 0.13
IFNA1P01562 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.89■□□□□ 0.13
IFNA1P01562 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IFNA1P01562 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
IFNA1P01562 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.89■□□□□ 0.13
IFNA1P01562 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 AC079598.2-202ENST00000546624 1451 ntBASIC15.89■□□□□ 0.13
IFNA1P01562 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFNA1P01562 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
IFNA1P01562 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
IFNA1P01562 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.88■□□□□ 0.13
IFNA1P01562 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
IFNA1P01562 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.88■□□□□ 0.13
IFNA1P01562 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
IFNA1P01562 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
IFNA1P01562 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IFNA1P01562 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
IFNA1P01562 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.88■□□□□ 0.13
IFNA1P01562 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.87■□□□□ 0.13
IFNA1P01562 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.87■□□□□ 0.13
IFNA1P01562 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.87■□□□□ 0.13
IFNA1P01562 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
IFNA1P01562 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.87■□□□□ 0.13
IFNA1P01562 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.87■□□□□ 0.13
IFNA1P01562 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.87■□□□□ 0.13
IFNA1P01562 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFNA1P01562 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
IFNA1P01562 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.87■□□□□ 0.13
IFNA1P01562 AC010980.1-201ENST00000587192 1142 ntBASIC15.87■□□□□ 0.13
IFNA1P01562 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
IFNA1P01562 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFNA1P01562 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IFNA1P01562 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms