Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN11O75508 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLDN11O75508 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
CLDN11O75508 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLDN11O75508 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN11O75508 SMG8-203ENST00000578922 2178 ntBASIC20.53■□□□□ 0.88
CLDN11O75508 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN11O75508 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN11O75508 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN11O75508 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN11O75508 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN11O75508 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN11O75508 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN11O75508 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN11O75508 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CLDN11O75508 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN11O75508 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN11O75508 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN11O75508 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN11O75508 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN11O75508 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN11O75508 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN11O75508 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN11O75508 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN11O75508 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN11O75508 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN11O75508 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN11O75508 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN11O75508 PRORSD1P-201ENST00000295112 541 ntBASIC20.52■□□□□ 0.88
CLDN11O75508 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN11O75508 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CLDN11O75508 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN11O75508 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
CLDN11O75508 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.52■□□□□ 0.88
CLDN11O75508 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN11O75508 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN11O75508 AC069544.1-201ENST00000609399 999 ntBASIC20.52■□□□□ 0.88
CLDN11O75508 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.52■□□□□ 0.88
CLDN11O75508 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLDN11O75508 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CLDN11O75508 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN11O75508 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLDN11O75508 GABARAPL3-202ENST00000624044 1851 ntBASIC20.52■□□□□ 0.87
CLDN11O75508 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN11O75508 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN11O75508 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN11O75508 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN11O75508 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN11O75508 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN11O75508 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLDN11O75508 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLDN11O75508 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN11O75508 RPS2P52-201ENST00000469610 820 ntBASIC20.51■□□□□ 0.87
CLDN11O75508 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN11O75508 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN11O75508 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN11O75508 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN11O75508 KRT16P6-202ENST00000425692 1426 ntBASIC20.51■□□□□ 0.87
CLDN11O75508 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CLDN11O75508 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN11O75508 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CLDN11O75508 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN11O75508 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.5■□□□□ 0.87
CLDN11O75508 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.5■□□□□ 0.87
CLDN11O75508 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN11O75508 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CLDN11O75508 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN11O75508 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CLDN11O75508 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN11O75508 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.49■□□□□ 0.87
CLDN11O75508 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CLDN11O75508 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN11O75508 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN11O75508 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN11O75508 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN11O75508 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN11O75508 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CLDN11O75508 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.49■□□□□ 0.87
CLDN11O75508 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.49■□□□□ 0.87
CLDN11O75508 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms