Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TRANK1O15050 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRANK1O15050 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
TRANK1O15050 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRANK1O15050 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRANK1O15050 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRANK1O15050 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRANK1O15050 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRANK1O15050 B3GAT3P1-201ENST00000471720 806 ntBASIC21.31■■□□□ 1
TRANK1O15050 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
TRANK1O15050 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.31■■□□□ 1
TRANK1O15050 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRANK1O15050 AC116407.4-201ENST00000623319 1061 ntBASIC21.31■■□□□ 1
TRANK1O15050 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRANK1O15050 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRANK1O15050 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.31■■□□□ 1
TRANK1O15050 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRANK1O15050 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.31■■□□□ 1
TRANK1O15050 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRANK1O15050 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRANK1O15050 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
TRANK1O15050 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRANK1O15050 AL450487.1-201ENST00000426799 995 ntBASIC21.3■■□□□ 1
TRANK1O15050 YBX1P2-201ENST00000489612 999 ntBASIC21.3■■□□□ 1
TRANK1O15050 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.3■■□□□ 1
TRANK1O15050 SLC25A1P4-201ENST00000567977 778 ntBASIC21.3■■□□□ 1
TRANK1O15050 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRANK1O15050 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRANK1O15050 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.3■■□□□ 1
TRANK1O15050 FAM207BP-201ENST00000447172 505 ntBASIC21.3■■□□□ 1
TRANK1O15050 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRANK1O15050 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRANK1O15050 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
TRANK1O15050 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
TRANK1O15050 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRANK1O15050 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.29■■□□□ 1
TRANK1O15050 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRANK1O15050 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRANK1O15050 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.29■■□□□ 1
TRANK1O15050 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.29■■□□□ 1
TRANK1O15050 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
TRANK1O15050 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
TRANK1O15050 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
TRANK1O15050 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.29■■□□□ 1
TRANK1O15050 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.29■■□□□ 1
TRANK1O15050 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.29■■□□□ 1
TRANK1O15050 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
TRANK1O15050 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.29■■□□□ 1
TRANK1O15050 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.29■■□□□ 1
TRANK1O15050 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRANK1O15050 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRANK1O15050 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRANK1O15050 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRANK1O15050 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRANK1O15050 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.29■■□□□ 1
TRANK1O15050 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TRANK1O15050 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.28■■□□□ 1
TRANK1O15050 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.28■■□□□ 1
TRANK1O15050 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRANK1O15050 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.28■■□□□ 1
TRANK1O15050 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRANK1O15050 LINC01238-205ENST00000567549 1107 ntBASIC21.28■■□□□ 1
TRANK1O15050 CR392000.1-201ENST00000624770 1228 ntBASIC21.28■■□□□ 1
TRANK1O15050 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.28■■□□□ 1
TRANK1O15050 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRANK1O15050 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.28■■□□□ 1
TRANK1O15050 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.28■■□□□ 1
TRANK1O15050 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRANK1O15050 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
TRANK1O15050 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.27■■□□□ 1
TRANK1O15050 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.27■■□□□ 1
TRANK1O15050 BX664615.1-201ENST00000443558 458 ntBASIC21.27■■□□□ 1
TRANK1O15050 AC091390.4-202ENST00000476426 537 ntBASIC21.27■■□□□ 1
TRANK1O15050 EGLN1P1-201ENST00000531623 762 ntBASIC21.27■■□□□ 1
TRANK1O15050 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TRANK1O15050 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.27■■□□□ 1
TRANK1O15050 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRANK1O15050 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.27■■□□□ 1
TRANK1O15050 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
TRANK1O15050 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRANK1O15050 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
TRANK1O15050 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRANK1O15050 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.27■■□□□ 1
TRANK1O15050 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRANK1O15050 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRANK1O15050 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRANK1O15050 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.26■□□□□ 0.99
TRANK1O15050 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.26■□□□□ 0.99
TRANK1O15050 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.26■□□□□ 0.99
TRANK1O15050 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRANK1O15050 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRANK1O15050 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRANK1O15050 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRANK1O15050 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRANK1O15050 AC139887.4-201ENST00000607877 719 ntBASIC21.26■□□□□ 0.99
TRANK1O15050 AL445675.2-201ENST00000620291 557 ntBASIC21.26■□□□□ 0.99
TRANK1O15050 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRANK1O15050 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRANK1O15050 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRANK1O15050 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms