Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.14■□□□□ 0.65
NTN3O00634 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.14■□□□□ 0.65
NTN3O00634 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.14■□□□□ 0.65
NTN3O00634 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.14■□□□□ 0.65
NTN3O00634 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NTN3O00634 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NTN3O00634 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NTN3O00634 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NTN3O00634 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
NTN3O00634 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.14■□□□□ 0.65
NTN3O00634 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
NTN3O00634 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NTN3O00634 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NTN3O00634 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NTN3O00634 TMPOP1-202ENST00000424642 1267 ntBASIC19.13■□□□□ 0.65
NTN3O00634 AC116562.2-201ENST00000507042 360 ntBASIC19.13■□□□□ 0.65
NTN3O00634 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NTN3O00634 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NTN3O00634 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.13■□□□□ 0.65
NTN3O00634 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NTN3O00634 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NTN3O00634 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NTN3O00634 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NTN3O00634 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.13■□□□□ 0.65
NTN3O00634 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NTN3O00634 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NTN3O00634 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.12■□□□□ 0.65
NTN3O00634 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NTN3O00634 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.12■□□□□ 0.65
NTN3O00634 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.12■□□□□ 0.65
NTN3O00634 KRT8P17-201ENST00000453110 1448 ntBASIC19.12■□□□□ 0.65
NTN3O00634 KRT8P9-201ENST00000558927 1449 ntBASIC19.12■□□□□ 0.65
NTN3O00634 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.12■□□□□ 0.65
NTN3O00634 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NTN3O00634 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NTN3O00634 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NTN3O00634 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.12■□□□□ 0.65
NTN3O00634 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NTN3O00634 RN7SL850P-201ENST00000579959 291 ntBASIC19.12■□□□□ 0.65
NTN3O00634 AP000525.1-201ENST00000608286 694 ntBASIC19.12■□□□□ 0.65
NTN3O00634 MIR6786-201ENST00000616843 113 ntBASIC19.12■□□□□ 0.65
NTN3O00634 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
NTN3O00634 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NTN3O00634 AL121603.2-201ENST00000557373 2117 ntBASIC19.12■□□□□ 0.65
NTN3O00634 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.12■□□□□ 0.65
NTN3O00634 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NTN3O00634 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.11■□□□□ 0.65
NTN3O00634 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.11■□□□□ 0.65
NTN3O00634 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NTN3O00634 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NTN3O00634 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NTN3O00634 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NTN3O00634 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
NTN3O00634 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.11■□□□□ 0.65
NTN3O00634 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NTN3O00634 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NTN3O00634 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.11■□□□□ 0.65
NTN3O00634 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.11■□□□□ 0.65
NTN3O00634 CR392000.1-201ENST00000624770 1228 ntBASIC19.11■□□□□ 0.65
NTN3O00634 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NTN3O00634 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NTN3O00634 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.1■□□□□ 0.65
NTN3O00634 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.1■□□□□ 0.65
NTN3O00634 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.1■□□□□ 0.65
NTN3O00634 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.1■□□□□ 0.65
NTN3O00634 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.1■□□□□ 0.65
NTN3O00634 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.1■□□□□ 0.65
NTN3O00634 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.1■□□□□ 0.65
NTN3O00634 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NTN3O00634 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.1■□□□□ 0.65
NTN3O00634 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NTN3O00634 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
NTN3O00634 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NTN3O00634 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NTN3O00634 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.09■□□□□ 0.65
NTN3O00634 KRT16P1-201ENST00000399124 1418 ntBASIC19.09■□□□□ 0.65
NTN3O00634 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.09■□□□□ 0.65
NTN3O00634 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NTN3O00634 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NTN3O00634 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.09■□□□□ 0.65
NTN3O00634 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NTN3O00634 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NTN3O00634 MIR1238-201ENST00000408483 83 ntBASIC19.09■□□□□ 0.65
NTN3O00634 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.09■□□□□ 0.65
NTN3O00634 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.09■□□□□ 0.65
NTN3O00634 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.09■□□□□ 0.65
NTN3O00634 FITM1-202ENST00000559294 800 ntBASIC19.09■□□□□ 0.65
NTN3O00634 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.09■□□□□ 0.65
NTN3O00634 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NTN3O00634 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms