Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 STRADB-208ENST00000484098 560 ntTSL 31.09□□□□□ -2.234e-10■■□□□ 12
PRPF8Q6P2Q9 ACSM3-211ENST00000567387 843 ntTSL 35.3□□□□□ -1.562e-9■■□□□ 12
PRPF8Q6P2Q9 ACSM3-214ENST00000569141 405 ntTSL 5-0.02□□□□□ -2.412e-9■■□□□ 12
PRPF8Q6P2Q9 ATP6V0A1-212ENST00000587375 546 ntTSL 47.18□□□□□ -1.262e-9■■□□□ 12
PRPF8Q6P2Q9 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.34□□□□□ -0.113e-7■■□□□ 12
PRPF8Q6P2Q9 CCDC14-204ENST00000417438 548 ntTSL 414.36□□□□□ -0.113e-8■■□□□ 12
PRPF8Q6P2Q9 CCDC14-209ENST00000435910 864 ntTSL 313.18□□□□□ -0.33e-8■■□□□ 12
PRPF8Q6P2Q9 CCDC14-213ENST00000477268 589 ntTSL 411.8□□□□□ -0.523e-8■■□□□ 12
PRPF8Q6P2Q9 CCDC14-214ENST00000478956 555 ntTSL 411.69□□□□□ -0.543e-8■■□□□ 12
PRPF8Q6P2Q9 CCDC14-210ENST00000438440 783 ntTSL 310.44□□□□□ -0.743e-8■■□□□ 12
PRPF8Q6P2Q9 JAG1-204ENST00000612857 586 ntTSL 58.03□□□□□ -1.122e-6■■□□□ 12
PRPF8Q6P2Q9 PPP2R1A-204ENST00000462047 561 ntTSL 214.65□□□□□ -0.069e-8■■□□□ 12
PRPF8Q6P2Q9 PPP2R1A-208ENST00000473820 646 ntTSL 28.68□□□□□ -1.029e-8■■□□□ 12
PRPF8Q6P2Q9 KANSL1-210ENST00000574963 1493 nt11.67□□□□□ -0.541e-8■■□□□ 12
PRPF8Q6P2Q9 SAFB-206ENST00000589006 459 ntTSL 516.43■□□□□ 0.222e-7■■□□□ 12
PRPF8Q6P2Q9 C9orf3-216ENST00000478603 802 ntTSL 219.71■□□□□ 0.751e-10■■□□□ 12
PRPF8Q6P2Q9 C9orf3-209ENST00000460573 443 ntTSL 518.62■□□□□ 0.571e-10■■□□□ 12
PRPF8Q6P2Q9 ARF1-209ENST00000478424 1059 ntTSL 221.54■■□□□ 1.042e-10■■□□□ 12
PRPF8Q6P2Q9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.522e-10■■□□□ 12
PRPF8Q6P2Q9 ARF1-206ENST00000473949 578 ntTSL 517.87■□□□□ 0.452e-10■■□□□ 12
PRPF8Q6P2Q9 ARF1-203ENST00000470558 820 ntTSL 213.31□□□□□ -0.282e-10■■□□□ 12
PRPF8Q6P2Q9 ARF1-204ENST00000470670 712 ntTSL 312.21□□□□□ -0.452e-10■■□□□ 12
PRPF8Q6P2Q9 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.972e-10■■□□□ 12
PRPF8Q6P2Q9 ZFYVE19-213ENST00000568062 580 ntTSL 320.3■□□□□ 0.849e-8■■□□□ 12
PRPF8Q6P2Q9 REC8-207ENST00000560501 653 ntTSL 418.48■□□□□ 0.559e-8■■□□□ 12
PRPF8Q6P2Q9 SEC13-217ENST00000482647 782 ntTSL 217.48■□□□□ 0.392e-9■■□□□ 12
PRPF8Q6P2Q9 ZFYVE19-210ENST00000566407 922 ntTSL 316.4■□□□□ 0.229e-8■■□□□ 12
PRPF8Q6P2Q9 DMPK-216ENST00000599002 313 ntTSL 216.19■□□□□ 0.184e-6■■□□□ 12
PRPF8Q6P2Q9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.56■□□□□ 0.089e-8■■□□□ 12
PRPF8Q6P2Q9 CDC34-206ENST00000606400 899 ntTSL 215.44■□□□□ 0.069e-8■■□□□ 12
PRPF8Q6P2Q9 TBCB-203ENST00000468156 630 ntTSL 215.34■□□□□ 0.059e-8■■□□□ 12
PRPF8Q6P2Q9 SUN2-205ENST00000420859 538 ntTSL 514.87□□□□□ -0.039e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-210ENST00000430102 702 ntTSL 314.52□□□□□ -0.089e-8■■□□□ 12
PRPF8Q6P2Q9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.43□□□□□ -0.12e-6■■□□□ 12
PRPF8Q6P2Q9 ZFYVE19-212ENST00000567756 571 ntTSL 313.54□□□□□ -0.249e-8■■□□□ 12
PRPF8Q6P2Q9 GHDC-211ENST00000590520 585 ntTSL 313.48□□□□□ -0.259e-8■■□□□ 12
PRPF8Q6P2Q9 REC8-206ENST00000560032 661 ntTSL 213.2□□□□□ -0.39e-8■■□□□ 12
PRPF8Q6P2Q9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.7□□□□□ -0.382e-6■■□□□ 12
PRPF8Q6P2Q9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.68□□□□□ -0.382e-6■■□□□ 12
PRPF8Q6P2Q9 HDAC5-203ENST00000586339 465 ntTSL 212.37□□□□□ -0.439e-8■■□□□ 12
PRPF8Q6P2Q9 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.23□□□□□ -0.452e-6■■□□□ 12
PRPF8Q6P2Q9 ZFYVE19-211ENST00000566767 617 ntTSL 211.91□□□□□ -0.59e-8■■□□□ 12
PRPF8Q6P2Q9 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC11.9□□□□□ -0.512e-6■■□□□ 12
PRPF8Q6P2Q9 ZFYVE19-205ENST00000561617 812 ntTSL 511.71□□□□□ -0.549e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-217ENST00000458177 1472 ntTSL 1 (best)11.49□□□□□ -0.579e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-211ENST00000433016 855 ntTSL 511.07□□□□□ -0.649e-8■■□□□ 12
PRPF8Q6P2Q9 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.72e-6■■□□□ 12
PRPF8Q6P2Q9 KRIT1-212ENST00000440209 557 ntTSL 49.92□□□□□ -0.829e-8■■□□□ 12
PRPF8Q6P2Q9 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC9.64□□□□□ -0.879e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.879e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-205ENST00000412043 3378 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.929e-8■■□□□ 12
PRPF8Q6P2Q9 SPTLC3-204ENST00000450297 645 ntTSL 38.38□□□□□ -1.079e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-216ENST00000454017 978 ntTSL 38.22□□□□□ -1.099e-8■■□□□ 12
PRPF8Q6P2Q9 TCTN3-206ENST00000497399 800 ntTSL 58.06□□□□□ -1.129e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.169e-8■■□□□ 12
PRPF8Q6P2Q9 ARHGEF17-204ENST00000537198 351 ntTSL 37.47□□□□□ -1.219e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC7.4□□□□□ -1.239e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.469e-8■■□□□ 12
PRPF8Q6P2Q9 SPTLC3-203ENST00000434210 572 ntTSL 35.79□□□□□ -1.489e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-222ENST00000486261 4057 ntTSL 1 (best)4.26□□□□□ -1.739e-8■■□□□ 12
PRPF8Q6P2Q9 SPTLC3-205ENST00000476791 2480 ntTSL 1 (best)3.61□□□□□ -1.839e-8■■□□□ 12
PRPF8Q6P2Q9 KRIT1-220ENST00000470309 580 ntTSL 3-0.9□□□□□ -2.559e-8■■□□□ 12
PRPF8Q6P2Q9 USP10-216ENST00000569511 571 ntTSL 515.05■□□□□ 06e-7■■□□□ 12
PRPF8Q6P2Q9 USP10-211ENST00000564566 561 ntTSL 414.9□□□□□ -0.026e-7■■□□□ 12
PRPF8Q6P2Q9 CSNK1D-207ENST00000578194 567 ntTSL 410.67□□□□□ -0.74e-14■■□□□ 12
PRPF8Q6P2Q9 GIGYF1-202ENST00000464111 656 ntTSL 316.88■□□□□ 0.293e-11■■□□□ 12
PRPF8Q6P2Q9 ZSWIM8-218ENST00000603840 970 ntTSL 1 (best)8.58□□□□□ -1.041e-7■■□□□ 12
PRPF8Q6P2Q9 SLC7A6-206ENST00000563146 514 ntTSL 38.86□□□□□ -0.993e-6■■□□□ 12
PRPF8Q6P2Q9 TCF25-212ENST00000564652 860 ntTSL 317.26■□□□□ 0.358e-7■■□□□ 12
PRPF8Q6P2Q9 TCF25-204ENST00000561958 763 ntTSL 314.84□□□□□ -0.034e-7■■□□□ 12
PRPF8Q6P2Q9 TCF25-222ENST00000568412 797 ntTSL 314.84□□□□□ -0.032e-7■■□□□ 12
PRPF8Q6P2Q9 TCF25-214ENST00000565196 655 ntTSL 514.23□□□□□ -0.136e-7■■□□□ 12
PRPF8Q6P2Q9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.86□□□□□ -0.198e-7■■□□□ 12
PRPF8Q6P2Q9 SFI1-201ENST00000357852 1453 ntTSL 1 (best)15.11■□□□□ 0.012e-6■■□□□ 12
PRPF8Q6P2Q9 SFI1-221ENST00000476577 1485 ntTSL 1 (best)14.48□□□□□ -0.092e-6■■□□□ 12
PRPF8Q6P2Q9 SFI1-219ENST00000474741 708 ntTSL 511.81□□□□□ -0.522e-6■■□□□ 12
PRPF8Q6P2Q9 SFI1-214ENST00000464333 3019 ntTSL 210.6□□□□□ -0.712e-6■■□□□ 12
PRPF8Q6P2Q9 NUP214-225ENST00000531584 545 ntTSL 43.76□□□□□ -1.812e-7■■□□□ 12
PRPF8Q6P2Q9 TKT-212ENST00000483706 565 ntTSL 213.53□□□□□ -0.245e-20■■□□□ 12
PRPF8Q6P2Q9 GAK-210ENST00000507991 328 ntTSL 58.96□□□□□ -0.985e-8■■□□□ 12
PRPF8Q6P2Q9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.123e-27■■□□□ 12
PRPF8Q6P2Q9 OAZ1-201ENST00000581150 1131 ntTSL 514.63□□□□□ -0.073e-27■■□□□ 12
PRPF8Q6P2Q9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.133e-27■■□□□ 12
PRPF8Q6P2Q9 OAZ1-210ENST00000593012 1357 ntTSL 214.2□□□□□ -0.143e-27■■□□□ 12
PRPF8Q6P2Q9 OAZ1-207ENST00000590943 1012 ntTSL 213.62□□□□□ -0.233e-27■■□□□ 12
PRPF8Q6P2Q9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.247e-7■■□□□ 12
PRPF8Q6P2Q9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.067e-7■■□□□ 12
PRPF8Q6P2Q9 SPIRE2-210ENST00000569108 2409 ntTSL 1 (best)14.24□□□□□ -0.137e-7■■□□□ 12
PRPF8Q6P2Q9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.962e-7■■□□□ 12
PRPF8Q6P2Q9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.12e-7■■□□□ 12
PRPF8Q6P2Q9 TF-212ENST00000493011 999 ntTSL 215.73■□□□□ 0.113e-13■■□□□ 12
PRPF8Q6P2Q9 TECR-221ENST00000600395 846 ntTSL 319.8■□□□□ 0.761e-9■■□□□ 12
PRPF8Q6P2Q9 TECR-223ENST00000601350 687 ntTSL 314.01□□□□□ -0.171e-9■■□□□ 12
PRPF8Q6P2Q9 TECR-222ENST00000601187 559 ntTSL 313.17□□□□□ -0.31e-9■■□□□ 12
PRPF8Q6P2Q9 TBC1D16-204ENST00000571872 567 ntTSL 514.84□□□□□ -0.035e-8■■□□□ 12
PRPF8Q6P2Q9 TRIO-213ENST00000509354 801 ntTSL 26.26□□□□□ -1.418e-7■■□□□ 12
PRPF8Q6P2Q9 ERBB3-204ENST00000546748 574 ntTSL 26.07□□□□□ -1.441e-9■■□□□ 12
PRPF8Q6P2Q9 SORBS3-204ENST00000517962 885 ntTSL 29.92□□□□□ -0.823e-7■■□□□ 12
PRPF8Q6P2Q9 AGRN-206ENST00000477585 707 ntTSL 320.7■□□□□ 0.94e-31■■□□□ 12
PRPF8Q6P2Q9 SIRT7-204ENST00000571213 683 ntTSL 220.3■□□□□ 0.841e-7■■□□□ 12
Retrieved 100 of 73,762 protein–RNA pairs in 1064.2 ms