RNA–Protein interactions for RNA: ENST00000470309.5

KRIT1-220, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 3

Gene KRIT1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-220ENST00000470309 AEBP2Q6ZN18 517 aaPredicted RBP32.87■■■□□ 2.85
KRIT1-220ENST00000470309 CHIC1Q5VXU3 224 aa30.89■■■□□ 2.54
KRIT1-220ENST00000470309 SENP3Q9H4L4 574 aaPredicted RBP28.23■■■□□ 2.11
KRIT1-220ENST00000470309 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
KRIT1-220ENST00000470309 FOXD1Q16676 465 aa26.29■■□□□ 1.8
KRIT1-220ENST00000470309 POTEDQ86YR6 584 aa24.89■■□□□ 1.58
KRIT1-220ENST00000470309 MSH5O43196 834 aa24.87■■□□□ 1.57
KRIT1-220ENST00000470309 PLPPR3Q6T4P5 718 aa24.55■■□□□ 1.52
KRIT1-220ENST00000470309 PIAS4Q8N2W9 510 aaPredicted RBP24.51■■□□□ 1.51
KRIT1-220ENST00000470309 PPP6R1Q9UPN7 881 aa24.23■■□□□ 1.47
KRIT1-220ENST00000470309 ADRA2BP18089 450 aa24.16■■□□□ 1.46
KRIT1-220ENST00000470309 MAPK8IP2Q13387 824 aaPredicted RBP22.3■■□□□ 1.16
KRIT1-220ENST00000470309 DMRT2Q9Y5R5 561 aa22.29■■□□□ 1.16
KRIT1-220ENST00000470309 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
KRIT1-220ENST00000470309 CACNB1Q02641 598 aaPredicted RBP21.59■■□□□ 1.05
KRIT1-220ENST00000470309 DCAF8L1A6NGE4 600 aa21.47■■□□□ 1.03
KRIT1-220ENST00000470309 PPP4R3CPQ6ZMV5 832 aa21.43■■□□□ 1.02
KRIT1-220ENST00000470309 HOXD11P31277 338 aaPredicted RBP21.3■■□□□ 1
KRIT1-220ENST00000470309 CNKSR2Q8WXI2 1034 aa21.15■□□□□ 0.98
KRIT1-220ENST00000470309 RNF39Q9H2S5 420 aa21.11■□□□□ 0.97
KRIT1-220ENST00000470309 RNF216Q9NWF9 866 aaPredicted RBP21.06■□□□□ 0.96
KRIT1-220ENST00000470309 C1QBPQ07021 282 aaKnown RBP20.84■□□□□ 0.93
KRIT1-220ENST00000470309 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
KRIT1-220ENST00000470309 NCBP3Q53F19 620 aaKnown RBP20.58■□□□□ 0.89
KRIT1-220ENST00000470309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.853e-6■□□□□ 11.3
KRIT1-220ENST00000470309 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
KRIT1-220ENST00000470309 U3KPZ7 1027 aaPredicted RBP19.8■□□□□ 0.76
KRIT1-220ENST00000470309 CAPN15O75808 1086 aa19.71■□□□□ 0.75
KRIT1-220ENST00000470309 SPINK5Q9NQ38 1064 aaPredicted RBP19.64■□□□□ 0.73
KRIT1-220ENST00000470309 DSG3P32926 999 aa19.63■□□□□ 0.73
KRIT1-220ENST00000470309 POTEHQ6S545 545 aa19.46■□□□□ 0.71
KRIT1-220ENST00000470309 APLP2Q06481 763 aa19.38■□□□□ 0.69
KRIT1-220ENST00000470309 KCNA4P22459 653 aa19.37■□□□□ 0.69
KRIT1-220ENST00000470309 SLC4A2P04920 1241 aa19.32■□□□□ 0.68
KRIT1-220ENST00000470309 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
KRIT1-220ENST00000470309 ZNF219Q9P2Y4 722 aaPredicted RBP19.25■□□□□ 0.67
KRIT1-220ENST00000470309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
KRIT1-220ENST00000470309 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
KRIT1-220ENST00000470309 ABCB7O75027 752 aa19.15■□□□□ 0.66
KRIT1-220ENST00000470309 SAMD1Q6SPF0 538 aaPredicted RBP19.07■□□□□ 0.64
KRIT1-220ENST00000470309 RBM42Q9BTD8 480 aaKnown RBP18.84■□□□□ 0.61
KRIT1-220ENST00000470309 MYCNP04198 464 aaPredicted RBP18.7■□□□□ 0.58
KRIT1-220ENST00000470309 POLA2Q14181 598 aa18.65■□□□□ 0.58
KRIT1-220ENST00000470309 CHRDL2Q6WN34 429 aa18.53■□□□□ 0.56
KRIT1-220ENST00000470309 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
KRIT1-220ENST00000470309 AKT1S1Q96B36 256 aa18.28■□□□□ 0.52
KRIT1-220ENST00000470309 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
KRIT1-220ENST00000470309 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
KRIT1-220ENST00000470309 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
KRIT1-220ENST00000470309 REM2Q8IYK8 340 aaPredicted RBP18.08■□□□□ 0.48
KRIT1-220ENST00000470309 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
KRIT1-220ENST00000470309 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
KRIT1-220ENST00000470309 PIP4P2Q8N4L2 257 aa17.97■□□□□ 0.47
KRIT1-220ENST00000470309 PITPNM1O00562 1244 aa17.86■□□□□ 0.45
KRIT1-220ENST00000470309 HAX1O00165 279 aa17.83■□□□□ 0.44
KRIT1-220ENST00000470309 FXR2P51116 673 aaKnown RBP eCLIP17.81■□□□□ 0.44
KRIT1-220ENST00000470309 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
KRIT1-220ENST00000470309 ZBTB22O15209 634 aa17.74■□□□□ 0.43
KRIT1-220ENST00000470309 FBLN2P98095 1184 aa17.69■□□□□ 0.42
KRIT1-220ENST00000470309 SPDYE2BA6NHP3 402 aa17.67■□□□□ 0.42
KRIT1-220ENST00000470309 SPDYE6P0CI01 402 aa17.67■□□□□ 0.42
KRIT1-220ENST00000470309 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
KRIT1-220ENST00000470309 SPDYE1Q8NFV5 336 aaPredicted RBP17.48■□□□□ 0.39
KRIT1-220ENST00000470309 CLEC11AQ9Y240 323 aa17.47■□□□□ 0.39
KRIT1-220ENST00000470309 EVX2Q03828 476 aa17.45■□□□□ 0.38
KRIT1-220ENST00000470309 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
KRIT1-220ENST00000470309 ZNF692Q9BU19 519 aaPredicted RBP17.4■□□□□ 0.38
KRIT1-220ENST00000470309 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
KRIT1-220ENST00000470309 SSUH2Q9Y2M2 353 aa17.33■□□□□ 0.36
KRIT1-220ENST00000470309 C19orf67A6NJJ6 358 aa17.25■□□□□ 0.35
KRIT1-220ENST00000470309 PRR29P0C7W0 189 aa17.13■□□□□ 0.33
KRIT1-220ENST00000470309 GABBR2O75899 941 aa17.11■□□□□ 0.33
KRIT1-220ENST00000470309 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
KRIT1-220ENST00000470309 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
KRIT1-220ENST00000470309 LHX8Q68G74 356 aa16.94■□□□□ 0.3
KRIT1-220ENST00000470309 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
KRIT1-220ENST00000470309 FARP1Q9Y4F1 1045 aaPredicted RBP16.85■□□□□ 0.29
KRIT1-220ENST00000470309 CLCN6P51797 869 aa16.81■□□□□ 0.28
KRIT1-220ENST00000470309 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
KRIT1-220ENST00000470309 DCBLD2Q96PD2 775 aa16.63■□□□□ 0.25
KRIT1-220ENST00000470309 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
KRIT1-220ENST00000470309 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
KRIT1-220ENST00000470309 ZNF579Q8NAF0 562 aaKnown RBP16.57■□□□□ 0.24
KRIT1-220ENST00000470309 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
KRIT1-220ENST00000470309 CREBZFQ9NS37 354 aa16.53■□□□□ 0.24
KRIT1-220ENST00000470309 PAK3O75914 559 aaPredicted RBP16.42■□□□□ 0.22
KRIT1-220ENST00000470309 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
KRIT1-220ENST00000470309 GALR2O43603 387 aaPredicted RBP16.36■□□□□ 0.21
KRIT1-220ENST00000470309 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
KRIT1-220ENST00000470309 PHF12Q96QT6 1004 aa16.25■□□□□ 0.19
KRIT1-220ENST00000470309 PLSCR2Q9NRY7 297 aa16.21■□□□□ 0.19
KRIT1-220ENST00000470309 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
KRIT1-220ENST00000470309 OTUD5Q96G74 571 aa16.17■□□□□ 0.18
KRIT1-220ENST00000470309 MNX1P50219 401 aaPredicted RBP16.15■□□□□ 0.18
KRIT1-220ENST00000470309 POTEB2H3BUK9 544 aa16.11■□□□□ 0.17
KRIT1-220ENST00000470309 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
KRIT1-220ENST00000470309 MS4A3Q96HJ5 214 aa16.02■□□□□ 0.16
KRIT1-220ENST00000470309 ASTLQ6HA08 431 aaPredicted RBP16.01■□□□□ 0.15
KRIT1-220ENST00000470309 C7P10643 843 aa16■□□□□ 0.15
KRIT1-220ENST00000470309 SLC39A7Q92504 469 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms