RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
SPTLC3-205ENST00000476791 CHIC1Q5VXU3 224 aa17.4■□□□□ 0.38
SPTLC3-205ENST00000476791 PHF23Q9BUL5 403 aaPredicted RBP15.32■□□□□ 0.04
SPTLC3-205ENST00000476791 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
SPTLC3-205ENST00000476791 FOXD1Q16676 465 aa14.25□□□□□ -0.13
SPTLC3-205ENST00000476791 PLPPR3Q6T4P5 718 aa14.05□□□□□ -0.16
SPTLC3-205ENST00000476791 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
SPTLC3-205ENST00000476791 ADRA2BP18089 450 aa13.58□□□□□ -0.24
SPTLC3-205ENST00000476791 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
SPTLC3-205ENST00000476791 MSH5O43196 834 aa13.18□□□□□ -0.3
SPTLC3-205ENST00000476791 MAPK8IP2Q13387 824 aaPredicted RBP12.39□□□□□ -0.43
SPTLC3-205ENST00000476791 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
SPTLC3-205ENST00000476791 POTEDQ86YR6 584 aa12.36□□□□□ -0.43
SPTLC3-205ENST00000476791 SCAF1Q9H7N4 1312 aaKnown RBP12.36□□□□□ -0.43
SPTLC3-205ENST00000476791 DMRT2Q9Y5R5 561 aa12.18□□□□□ -0.46
SPTLC3-205ENST00000476791 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
SPTLC3-205ENST00000476791 NCBP3Q53F19 620 aaKnown RBP11.97□□□□□ -0.49
SPTLC3-205ENST00000476791 KCNA4P22459 653 aa11.92□□□□□ -0.5
SPTLC3-205ENST00000476791 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
SPTLC3-205ENST00000476791 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
SPTLC3-205ENST00000476791 NPM3O75607 178 aaKnown RBP11.83□□□□□ -0.52
SPTLC3-205ENST00000476791 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
SPTLC3-205ENST00000476791 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
SPTLC3-205ENST00000476791 DNAJC5BQ9UF47 199 aa11.4□□□□□ -0.59
SPTLC3-205ENST00000476791 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.592e-13■□□□□ 10.1
SPTLC3-205ENST00000476791 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
SPTLC3-205ENST00000476791 RNF39Q9H2S5 420 aa11.29□□□□□ -0.6
SPTLC3-205ENST00000476791 SLC4A2P04920 1241 aa11.21□□□□□ -0.61
SPTLC3-205ENST00000476791 CACNB1Q02641 598 aaPredicted RBP11.16□□□□□ -0.62
SPTLC3-205ENST00000476791 C1QBPQ07021 282 aaKnown RBP11.12□□□□□ -0.63
SPTLC3-205ENST00000476791 U3KPZ7 1027 aaPredicted RBP11.12□□□□□ -0.63
SPTLC3-205ENST00000476791 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
SPTLC3-205ENST00000476791 MYT1Q01538 1121 aa10.99□□□□□ -0.65
SPTLC3-205ENST00000476791 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
SPTLC3-205ENST00000476791 ZBTB22O15209 634 aa10.96□□□□□ -0.65
SPTLC3-205ENST00000476791 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.66
SPTLC3-205ENST00000476791 MYCNP04198 464 aaPredicted RBP10.91□□□□□ -0.66
SPTLC3-205ENST00000476791 SPINK5Q9NQ38 1064 aaPredicted RBP10.9□□□□□ -0.66
SPTLC3-205ENST00000476791 DAXXQ9UER7 740 aaPredicted RBP10.89□□□□□ -0.67
SPTLC3-205ENST00000476791 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.88□□□□□ -0.67
SPTLC3-205ENST00000476791 HNRNPUL2Q1KMD3 747 aaKnown RBP10.88□□□□□ -0.67
SPTLC3-205ENST00000476791 CAPN15O75808 1086 aa10.86□□□□□ -0.67
SPTLC3-205ENST00000476791 APLP2Q06481 763 aa10.86□□□□□ -0.67
SPTLC3-205ENST00000476791 SAMD1Q6SPF0 538 aaPredicted RBP10.84□□□□□ -0.67
SPTLC3-205ENST00000476791 TTBK1Q5TCY1 1321 aaPredicted RBP10.84□□□□□ -0.67
SPTLC3-205ENST00000476791 EHMT2Q96KQ7 1210 aa10.83□□□□□ -0.68
SPTLC3-205ENST00000476791 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
SPTLC3-205ENST00000476791 CSRNP3Q8WYN3 585 aa10.74□□□□□ -0.69
SPTLC3-205ENST00000476791 ZNF219Q9P2Y4 722 aaPredicted RBP10.71□□□□□ -0.69
SPTLC3-205ENST00000476791 DSG3P32926 999 aa10.69□□□□□ -0.7
SPTLC3-205ENST00000476791 ATF5Q9Y2D1 282 aaPredicted RBP10.69□□□□□ -0.7
SPTLC3-205ENST00000476791 ABCB7O75027 752 aa10.66□□□□□ -0.7
SPTLC3-205ENST00000476791 ERICH6Q7L0X2 663 aa10.63□□□□□ -0.71
SPTLC3-205ENST00000476791 ATXN8OSP0DMR3 200 aa10.57□□□□□ -0.72
SPTLC3-205ENST00000476791 POLA2Q14181 598 aa10.55□□□□□ -0.72
SPTLC3-205ENST00000476791 RTN4Q9NQC3 1192 aaKnown RBP10.43□□□□□ -0.74
SPTLC3-205ENST00000476791 ZBTB12Q9Y330 459 aaPredicted RBP10.29□□□□□ -0.76
SPTLC3-205ENST00000476791 EIF5BO60841 1220 aaKnown RBP10.22□□□□□ -0.77
SPTLC3-205ENST00000476791 FBLN2P98095 1184 aa10.21□□□□□ -0.78
SPTLC3-205ENST00000476791 OSCARQ8IYS5 282 aa10.21□□□□□ -0.78
SPTLC3-205ENST00000476791 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
SPTLC3-205ENST00000476791 RBM42Q9BTD8 480 aaKnown RBP10.16□□□□□ -0.78
SPTLC3-205ENST00000476791 PLEKHG5O94827 1062 aa10.15□□□□□ -0.78
SPTLC3-205ENST00000476791 TIMELESSQ9UNS1 1208 aa10.14□□□□□ -0.79
SPTLC3-205ENST00000476791 BCL11AQ9H165 835 aa10.13□□□□□ -0.79
SPTLC3-205ENST00000476791 KLHL34Q8N239 644 aa10.07□□□□□ -0.8
SPTLC3-205ENST00000476791 ARXQ96QS3 562 aa10.03□□□□□ -0.8
SPTLC3-205ENST00000476791 SPDYE2BA6NHP3 402 aa10.01□□□□□ -0.81
SPTLC3-205ENST00000476791 SPDYE6P0CI01 402 aa10.01□□□□□ -0.81
SPTLC3-205ENST00000476791 SPDYE2Q495Y8 402 aa10.01□□□□□ -0.81
SPTLC3-205ENST00000476791 FAM9AQ8IZU1 332 aaPredicted RBP10□□□□□ -0.81
SPTLC3-205ENST00000476791 AKT1S1Q96B36 256 aa10□□□□□ -0.81
SPTLC3-205ENST00000476791 ZNF692Q9BU19 519 aaPredicted RBP9.99□□□□□ -0.81
SPTLC3-205ENST00000476791 REM2Q8IYK8 340 aaPredicted RBP9.93□□□□□ -0.82
SPTLC3-205ENST00000476791 SSUH2Q9Y2M2 353 aa9.92□□□□□ -0.82
SPTLC3-205ENST00000476791 TULP1O00294 542 aaPredicted RBP9.9□□□□□ -0.82
SPTLC3-205ENST00000476791 SPDYE4A6NLX3 237 aa9.88□□□□□ -0.83
SPTLC3-205ENST00000476791 PABPN1Q86U42 306 aaKnown RBP eCLIP9.85□□□□□ -0.83
SPTLC3-205ENST00000476791 CHRDL2Q6WN34 429 aa9.85□□□□□ -0.83
SPTLC3-205ENST00000476791 AMER1Q5JTC6 1135 aaPredicted RBP9.84□□□□□ -0.83
SPTLC3-205ENST00000476791 PITPNM1O00562 1244 aa9.83□□□□□ -0.84
SPTLC3-205ENST00000476791 RANGAP1P46060 587 aaPredicted RBP9.83□□□□□ -0.84
SPTLC3-205ENST00000476791 CLEC11AQ9Y240 323 aa9.8□□□□□ -0.84
SPTLC3-205ENST00000476791 SPDYE1Q8NFV5 336 aaPredicted RBP9.77□□□□□ -0.85
SPTLC3-205ENST00000476791 POTEHQ6S545 545 aa9.75□□□□□ -0.85
SPTLC3-205ENST00000476791 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
SPTLC3-205ENST00000476791 FKBP8Q14318 412 aa9.74□□□□□ -0.85
SPTLC3-205ENST00000476791 HOMEZQ8IX15 550 aa9.7□□□□□ -0.86
SPTLC3-205ENST00000476791 TAOK2Q9UL54 1235 aa9.7□□□□□ -0.86
SPTLC3-205ENST00000476791 PIP4P2Q8N4L2 257 aa9.69□□□□□ -0.86
SPTLC3-205ENST00000476791 PRR29P0C7W0 189 aa9.65□□□□□ -0.86
SPTLC3-205ENST00000476791 FXR2P51116 673 aaKnown RBP eCLIP9.65□□□□□ -0.86
SPTLC3-205ENST00000476791 PROM2Q8N271 834 aa9.63□□□□□ -0.87
SPTLC3-205ENST00000476791 STAG3Q9UJ98 1225 aa9.6□□□□□ -0.87
SPTLC3-205ENST00000476791 PRKAR2AP13861 404 aaKnown RBP9.59□□□□□ -0.87
SPTLC3-205ENST00000476791 CHADLQ6NUI6 762 aa9.59□□□□□ -0.87
SPTLC3-205ENST00000476791 TPRNQ4KMQ1 711 aa9.56□□□□□ -0.88
SPTLC3-205ENST00000476791 UBE2Q2Q8WVN8 375 aa9.5□□□□□ -0.89
SPTLC3-205ENST00000476791 PDIA4P13667 645 aaKnown RBP9.49□□□□□ -0.89
SPTLC3-205ENST00000476791 NPM2Q86SE8 214 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms