RNA–Protein interactions for RNA: ENST00000484098.5

STRADB-208, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-208ENST00000484098 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
STRADB-208ENST00000484098 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
STRADB-208ENST00000484098 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
STRADB-208ENST00000484098 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
STRADB-208ENST00000484098 FOXD1Q16676 465 aa17.39■□□□□ 0.37
STRADB-208ENST00000484098 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
STRADB-208ENST00000484098 MSH5O43196 834 aa16.45■□□□□ 0.22
STRADB-208ENST00000484098 PIAS4Q8N2W9 510 aaPredicted RBP16.21■□□□□ 0.19
STRADB-208ENST00000484098 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
STRADB-208ENST00000484098 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.15
STRADB-208ENST00000484098 ADRA2BP18089 450 aa15.92■□□□□ 0.14
STRADB-208ENST00000484098 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
STRADB-208ENST00000484098 DMRT2Q9Y5R5 561 aa14.7□□□□□ -0.06
STRADB-208ENST00000484098 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
STRADB-208ENST00000484098 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
STRADB-208ENST00000484098 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
STRADB-208ENST00000484098 PPP4R3CPQ6ZMV5 832 aa14.04□□□□□ -0.16
STRADB-208ENST00000484098 HOXD11P31277 338 aaPredicted RBP14□□□□□ -0.17
STRADB-208ENST00000484098 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
STRADB-208ENST00000484098 CNKSR2Q8WXI2 1034 aa13.86□□□□□ -0.19
STRADB-208ENST00000484098 RNF216Q9NWF9 866 aaPredicted RBP13.82□□□□□ -0.2
STRADB-208ENST00000484098 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
STRADB-208ENST00000484098 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
STRADB-208ENST00000484098 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
STRADB-208ENST00000484098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
STRADB-208ENST00000484098 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
STRADB-208ENST00000484098 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
STRADB-208ENST00000484098 CAPN15O75808 1086 aa13.02□□□□□ -0.33
STRADB-208ENST00000484098 POTEHQ6S545 545 aa12.99□□□□□ -0.33
STRADB-208ENST00000484098 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
STRADB-208ENST00000484098 DSG3P32926 999 aa12.96□□□□□ -0.33
STRADB-208ENST00000484098 TRHP20396 242 aaPredicted RBP12.71□□□□□ -0.37
STRADB-208ENST00000484098 APLP2Q06481 763 aa12.69□□□□□ -0.38
STRADB-208ENST00000484098 ABCB7O75027 752 aa12.67□□□□□ -0.38
STRADB-208ENST00000484098 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
STRADB-208ENST00000484098 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
STRADB-208ENST00000484098 KCNA4P22459 653 aa12.63□□□□□ -0.39
STRADB-208ENST00000484098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
STRADB-208ENST00000484098 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
STRADB-208ENST00000484098 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
STRADB-208ENST00000484098 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
STRADB-208ENST00000484098 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
STRADB-208ENST00000484098 POLA2Q14181 598 aa12.26□□□□□ -0.45
STRADB-208ENST00000484098 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
STRADB-208ENST00000484098 AKT1S1Q96B36 256 aa12.03□□□□□ -0.48
STRADB-208ENST00000484098 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
STRADB-208ENST00000484098 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
STRADB-208ENST00000484098 ATF5Q9Y2D1 282 aaPredicted RBP11.95□□□□□ -0.5
STRADB-208ENST00000484098 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
STRADB-208ENST00000484098 FOXD4L1Q9NU39 408 aa11.92□□□□□ -0.5
STRADB-208ENST00000484098 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
STRADB-208ENST00000484098 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
STRADB-208ENST00000484098 SLC4A1APQ9BWU0 796 aaKnown RBP11.87□□□□□ -0.51
STRADB-208ENST00000484098 HAX1O00165 279 aa11.81□□□□□ -0.52
STRADB-208ENST00000484098 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
STRADB-208ENST00000484098 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
STRADB-208ENST00000484098 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
STRADB-208ENST00000484098 ZBTB22O15209 634 aa11.58□□□□□ -0.56
STRADB-208ENST00000484098 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
STRADB-208ENST00000484098 EVX2Q03828 476 aa11.58□□□□□ -0.56
STRADB-208ENST00000484098 SPDYE2Q495Y8 402 aa11.58□□□□□ -0.56
STRADB-208ENST00000484098 FBLN2P98095 1184 aa11.57□□□□□ -0.56
STRADB-208ENST00000484098 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
STRADB-208ENST00000484098 PRKAR2AP13861 404 aaKnown RBP11.51□□□□□ -0.57
STRADB-208ENST00000484098 CLEC11AQ9Y240 323 aa11.51□□□□□ -0.57
STRADB-208ENST00000484098 SPDYE1Q8NFV5 336 aaPredicted RBP11.49□□□□□ -0.57
STRADB-208ENST00000484098 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
STRADB-208ENST00000484098 C19orf67A6NJJ6 358 aa11.39□□□□□ -0.59
STRADB-208ENST00000484098 MKRN4PQ13434 485 aaPredicted RBP11.37□□□□□ -0.59
STRADB-208ENST00000484098 SSUH2Q9Y2M2 353 aa11.37□□□□□ -0.59
STRADB-208ENST00000484098 GABBR2O75899 941 aa11.32□□□□□ -0.6
STRADB-208ENST00000484098 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
STRADB-208ENST00000484098 LHX8Q68G74 356 aa11.26□□□□□ -0.61
STRADB-208ENST00000484098 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
STRADB-208ENST00000484098 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
STRADB-208ENST00000484098 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
STRADB-208ENST00000484098 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
STRADB-208ENST00000484098 POTEIP0CG38 1075 aa11.05□□□□□ -0.64
STRADB-208ENST00000484098 CLCN6P51797 869 aa11.01□□□□□ -0.65
STRADB-208ENST00000484098 DCBLD2Q96PD2 775 aa10.99□□□□□ -0.65
STRADB-208ENST00000484098 ZRANB1Q9UGI0 708 aa10.93□□□□□ -0.66
STRADB-208ENST00000484098 ZNF579Q8NAF0 562 aaKnown RBP10.92□□□□□ -0.66
STRADB-208ENST00000484098 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
STRADB-208ENST00000484098 CREBZFQ9NS37 354 aa10.84□□□□□ -0.67
STRADB-208ENST00000484098 STAG3Q9UJ98 1225 aa10.83□□□□□ -0.68
STRADB-208ENST00000484098 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
STRADB-208ENST00000484098 PAK3O75914 559 aaPredicted RBP10.79□□□□□ -0.68
STRADB-208ENST00000484098 PHF12Q96QT6 1004 aa10.74□□□□□ -0.69
STRADB-208ENST00000484098 OTUD5Q96G74 571 aa10.73□□□□□ -0.69
STRADB-208ENST00000484098 CSRNP3Q8WYN3 585 aa10.72□□□□□ -0.69
STRADB-208ENST00000484098 SPDYE4A6NLX3 237 aa10.7□□□□□ -0.7
STRADB-208ENST00000484098 POTEB2H3BUK9 544 aa10.68□□□□□ -0.7
STRADB-208ENST00000484098 NPM1P06748 294 aaKnown RBP eCLIP10.68□□□□□ -0.7
STRADB-208ENST00000484098 POTEMA6NI47 508 aa10.64□□□□□ -0.71
STRADB-208ENST00000484098 PELP1Q8IZL8 1130 aaKnown RBP10.61□□□□□ -0.71
STRADB-208ENST00000484098 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
STRADB-208ENST00000484098 POTEGQ6S5H5 508 aa10.59□□□□□ -0.71
STRADB-208ENST00000484098 MS4A3Q96HJ5 214 aa10.58□□□□□ -0.72
STRADB-208ENST00000484098 METRNQ9UJH8 293 aa10.58□□□□□ -0.72
STRADB-208ENST00000484098 ASTLQ6HA08 431 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms