Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ZNF559-214ENST00000605750 2117 ntTSL 27.12□□□□□ -1.277e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC6.9□□□□□ -1.37e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-210ENST00000604543 585 ntTSL 46.82□□□□□ -1.327e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-218ENST00000605775 604 ntTSL 46.1□□□□□ -1.437e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-214ENST00000605093 591 ntTSL 45.93□□□□□ -1.467e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-208ENST00000589208 569 ntTSL 45.56□□□□□ -1.527e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-206ENST00000603024 610 ntTSL 45.39□□□□□ -1.557e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-207ENST00000603099 584 ntTSL 45.25□□□□□ -1.577e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.24□□□□□ -1.577e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.08□□□□□ -1.67e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.67e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-217ENST00000605522 549 ntTSL 44.57□□□□□ -1.687e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.16□□□□□ -1.747e-10■■□□□ 12.1
PRPF8Q6P2Q9 ZNF559-ZNF177-215ENST00000605301 565 ntTSL 43.27□□□□□ -1.897e-10■■□□□ 12.1
PRPF8Q6P2Q9 UQCRC1-208ENST00000472438 477 ntTSL 211.08□□□□□ -0.648e-7■■□□□ 12.1
PRPF8Q6P2Q9 LRRC75B-205ENST00000464490 575 ntTSL 413.96□□□□□ -0.177e-9■■□□□ 12.1
PRPF8Q6P2Q9 ZNF444-202ENST00000586123 574 ntTSL 420.5■□□□□ 0.872e-7■■□□□ 12.1
PRPF8Q6P2Q9 ZNF444-208ENST00000588358 642 ntTSL 219.41■□□□□ 0.72e-7■■□□□ 12.1
PRPF8Q6P2Q9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.72■□□□□ 0.274e-6■■□□□ 12.1
PRPF8Q6P2Q9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.91■□□□□ 0.144e-6■■□□□ 12.1
PRPF8Q6P2Q9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.434e-6■■□□□ 12.1
PRPF8Q6P2Q9 CLK3-213ENST00000563842 860 ntTSL 511.47□□□□□ -0.572e-12■■□□□ 12.1
PRPF8Q6P2Q9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.035e-6■■□□□ 12.1
PRPF8Q6P2Q9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.73■□□□□ 0.431e-8■■□□□ 12.1
PRPF8Q6P2Q9 ARFRP1-211ENST00000618568 1612 ntTSL 316.92■□□□□ 0.31e-8■■□□□ 12.1
PRPF8Q6P2Q9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.131e-8■■□□□ 12.1
PRPF8Q6P2Q9 MCRIP2-210ENST00000620462 1594 ntTSL 515.64■□□□□ 0.098e-15■■□□□ 12.1
PRPF8Q6P2Q9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.6■□□□□ 0.091e-8■■□□□ 12.1
PRPF8Q6P2Q9 MCRIP2-206ENST00000615744 1379 ntTSL 315.56■□□□□ 0.088e-15■■□□□ 12.1
PRPF8Q6P2Q9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.47■□□□□ 0.071e-8■■□□□ 12.1
PRPF8Q6P2Q9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.211e-8■■□□□ 12.1
PRPF8Q6P2Q9 MCRIP2-209ENST00000619674 2306 ntTSL 213.11□□□□□ -0.318e-15■■□□□ 12.1
PRPF8Q6P2Q9 MYL6B-202ENST00000548548 887 ntTSL 212.94□□□□□ -0.343e-9■■□□□ 12.1
PRPF8Q6P2Q9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.341e-8■■□□□ 12.1
PRPF8Q6P2Q9 MYL6B-208ENST00000550550 322 ntTSL 211.27□□□□□ -0.613e-9■■□□□ 12.1
PRPF8Q6P2Q9 MYL6B-204ENST00000549178 971 ntTSL 510.04□□□□□ -0.83e-9■■□□□ 12.1
PRPF8Q6P2Q9 MYL6B-207ENST00000550443 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.83e-9■■□□□ 12.1
PRPF8Q6P2Q9 MYL6B-210ENST00000552568 703 ntTSL 5 BASIC10.04□□□□□ -0.83e-9■■□□□ 12.1
PRPF8Q6P2Q9 MYL6B-211ENST00000553066 1305 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.853e-9■■□□□ 12.1
PRPF8Q6P2Q9 MYL6B-205ENST00000549380 221 ntTSL 27.33□□□□□ -1.243e-9■■□□□ 12.1
PRPF8Q6P2Q9 ANKZF1-212ENST00000464763 647 ntTSL 1 (best)16.69■□□□□ 0.262e-15■■□□□ 12.1
PRPF8Q6P2Q9 TRIM11-203ENST00000475775 693 ntTSL 213.13□□□□□ -0.312e-15■■□□□ 12.1
PRPF8Q6P2Q9 ANKZF1-207ENST00000447157 537 ntTSL 413.07□□□□□ -0.322e-15■■□□□ 12.1
PRPF8Q6P2Q9 ANKZF1-204ENST00000416565 552 ntTSL 410.68□□□□□ -0.72e-15■■□□□ 12.1
PRPF8Q6P2Q9 ANKZF1-208ENST00000453432 511 ntTSL 310□□□□□ -0.812e-15■■□□□ 12.1
PRPF8Q6P2Q9 ANKZF1-206ENST00000436226 571 ntTSL 39.28□□□□□ -0.922e-15■■□□□ 12.1
PRPF8Q6P2Q9 XYLT2-204ENST00000509778 145 ntTSL 38.79□□□□□ -12e-15■■□□□ 12.1
PRPF8Q6P2Q9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 14e-7■■□□□ 12.1
PRPF8Q6P2Q9 DUSP12-204ENST00000484291 1252 ntTSL 514.95□□□□□ -0.024e-7■■□□□ 12.1
PRPF8Q6P2Q9 DUSP12-203ENST00000464004 740 ntTSL 214.6□□□□□ -0.074e-7■■□□□ 12.1
PRPF8Q6P2Q9 DUSP12-205ENST00000490591 657 ntTSL 514.6□□□□□ -0.074e-7■■□□□ 12.1
PRPF8Q6P2Q9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.084e-7■■□□□ 12.1
PRPF8Q6P2Q9 TSR3-202ENST00000566296 649 ntTSL 314.52□□□□□ -0.094e-7■■□□□ 12.1
PRPF8Q6P2Q9 STAT2-205ENST00000555646 603 ntTSL 44.26□□□□□ -1.731e-8■■□□□ 12.1
PRPF8Q6P2Q9 PLCXD1-205ENST00000429181 469 ntTSL 412.56□□□□□ -0.41e-11■■□□□ 12.1
PRPF8Q6P2Q9 NCSTN-207ENST00000437169 448 ntTSL 316.4■□□□□ 0.221e-9■■□□□ 12.1
PRPF8Q6P2Q9 NCSTN-208ENST00000438008 702 ntTSL 515.01□□□□□ -0.011e-9■■□□□ 12.1
PRPF8Q6P2Q9 NCSTN-210ENST00000465223 545 ntTSL 213.84□□□□□ -0.191e-9■■□□□ 12.1
PRPF8Q6P2Q9 NCSTN-211ENST00000467837 726 ntTSL 513.69□□□□□ -0.221e-9■■□□□ 12.1
PRPF8Q6P2Q9 CREBBP-211ENST00000575237 403 ntTSL 212.78□□□□□ -0.361e-8■■□□□ 12.1
PRPF8Q6P2Q9 BAIAP2-216ENST00000574027 604 ntTSL 412.95□□□□□ -0.342e-8■■□□□ 12.1
PRPF8Q6P2Q9 RPAP1-203ENST00000561631 401 ntTSL 311.18□□□□□ -0.622e-8■■□□□ 12.1
PRPF8Q6P2Q9 RPAP1-207ENST00000565035 601 ntTSL 48.66□□□□□ -1.022e-8■■□□□ 12.1
PRPF8Q6P2Q9 SMAD3-208ENST00000558827 552 ntTSL 410.71□□□□□ -0.692e-8■■□□□ 12.1
PRPF8Q6P2Q9 SMAD3-205ENST00000558428 554 ntTSL 410.46□□□□□ -0.732e-8■■□□□ 12.1
PRPF8Q6P2Q9 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC7.96□□□□□ -1.138e-9■■□□□ 12.1
PRPF8Q6P2Q9 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.582e-6■■□□□ 12.1
PRPF8Q6P2Q9 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.592e-6■■□□□ 12.1
PRPF8Q6P2Q9 CDIP1-213ENST00000589159 838 ntTSL 510.63□□□□□ -0.712e-6■■□□□ 12.1
PRPF8Q6P2Q9 PNCK-216ENST00000458354 498 ntTSL 324.62■■□□□ 1.535e-17■■□□□ 12.1
PRPF8Q6P2Q9 PNCK-227ENST00000475172 877 ntTSL 520.71■□□□□ 0.915e-17■■□□□ 12.1
PRPF8Q6P2Q9 PNCK-220ENST00000465303 868 ntTSL 416.28■□□□□ 0.25e-17■■□□□ 12.1
PRPF8Q6P2Q9 PNCK-209ENST00000423545 448 ntTSL 415.8■□□□□ 0.125e-17■■□□□ 12.1
PRPF8Q6P2Q9 PNCK-207ENST00000419804 561 ntTSL 415.77■□□□□ 0.125e-17■■□□□ 12.1
PRPF8Q6P2Q9 PNCK-219ENST00000463548 783 ntTSL 515.77■□□□□ 0.125e-17■■□□□ 12.1
PRPF8Q6P2Q9 PNCK-223ENST00000466662 464 ntTSL 315.38■□□□□ 0.055e-17■■□□□ 12.1
PRPF8Q6P2Q9 PNCK-206ENST00000418241 566 ntTSL 314.7□□□□□ -0.065e-17■■□□□ 12.1
PRPF8Q6P2Q9 PNCK-212ENST00000434652 311 ntTSL 514.7□□□□□ -0.065e-17■■□□□ 12.1
PRPF8Q6P2Q9 TAF4-208ENST00000609041 2487 nt14.64□□□□□ -0.072e-8■■□□□ 12.1
PRPF8Q6P2Q9 PNCK-210ENST00000425526 725 ntTSL 513.73□□□□□ -0.215e-17■■□□□ 12.1
PRPF8Q6P2Q9 GPT-201ENST00000354769 583 ntTSL 214.7□□□□□ -0.061e-7■■□□□ 12.1
PRPF8Q6P2Q9 FOXA1-203ENST00000553751 507 ntTSL 417.3■□□□□ 0.366e-9■■□□□ 12.1
PRPF8Q6P2Q9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.296e-9■■□□□ 12.1
PRPF8Q6P2Q9 FAM118A-206ENST00000452238 583 ntTSL 55.45□□□□□ -1.549e-8■■□□□ 12.1
PRPF8Q6P2Q9 GATAD2A-211ENST00000473184 430 ntTSL 34.45□□□□□ -1.72e-6■■□□□ 12.1
PRPF8Q6P2Q9 LIMD1-AS1-202ENST00000429798 955 ntTSL 1 (best)8.36□□□□□ -1.072e-18■■□□□ 12.1
PRPF8Q6P2Q9 NSD2-221ENST00000511904 690 ntTSL 56.65□□□□□ -1.351e-8■■□□□ 12.1
PRPF8Q6P2Q9 ARHGAP1-204ENST00000526423 1377 ntTSL 1 (best)9.43□□□□□ -0.93e-7■■□□□ 12.1
PRPF8Q6P2Q9 ZNF264-204ENST00000597447 681 ntTSL 318.65■□□□□ 0.581e-7■■□□□ 12.1
PRPF8Q6P2Q9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.351e-7■■□□□ 12.1
PRPF8Q6P2Q9 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.891e-7■■□□□ 12.1
PRPF8Q6P2Q9 SPON2-211ENST00000507466 525 ntTSL 219.8■□□□□ 0.762e-27■■□□□ 12.1
PRPF8Q6P2Q9 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.773e-6■■□□□ 12.1
PRPF8Q6P2Q9 SLC22A18-213ENST00000498244 325 ntTSL 219.5■□□□□ 0.713e-6■■□□□ 12.1
PRPF8Q6P2Q9 ACSF2-214ENST00000508245 665 ntTSL 510.68□□□□□ -0.74e-7■■□□□ 12.1
PRPF8Q6P2Q9 ACSF2-217ENST00000510262 407 ntTSL 57.2□□□□□ -1.264e-7■■□□□ 12.1
PRPF8Q6P2Q9 MICALL2-214ENST00000493998 404 ntTSL 211.15□□□□□ -0.622e-11■■□□□ 12.1
PRPF8Q6P2Q9 SEC61A1-206ENST00000491668 558 ntTSL 410.92□□□□□ -0.669e-15■■□□□ 12.1
PRPF8Q6P2Q9 CALM2-208ENST00000489742 522 ntTSL 313.44□□□□□ -0.265e-18■■□□□ 12.1
PRPF8Q6P2Q9 SLC17A9-203ENST00000411611 565 ntTSL 212.05□□□□□ -0.488e-14■■□□□ 12.1
Retrieved 100 of 73,762 protein–RNA pairs in 1132.4 ms