RNA–Protein interactions for RNA: ENST00000592896.5

ZNF559-212, Transcript of zinc finger protein 559, humanhuman

TSL 1 (best) BASIC

Gene ZNF559, Length 1,488 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-212ENST00000592896 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.14
ZNF559-212ENST00000592896 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
ZNF559-212ENST00000592896 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
ZNF559-212ENST00000592896 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
ZNF559-212ENST00000592896 FOXD1Q16676 465 aa17.59■□□□□ 0.41
ZNF559-212ENST00000592896 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
ZNF559-212ENST00000592896 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
ZNF559-212ENST00000592896 ADRA2BP18089 450 aa16.61■□□□□ 0.25
ZNF559-212ENST00000592896 MSH5O43196 834 aa16.59■□□□□ 0.25
ZNF559-212ENST00000592896 PIAS4Q8N2W9 510 aaPredicted RBP16.46■□□□□ 0.23
ZNF559-212ENST00000592896 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
ZNF559-212ENST00000592896 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
ZNF559-212ENST00000592896 SCAF1Q9H7N4 1312 aaKnown RBP15.06■□□□□ 0
ZNF559-212ENST00000592896 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
ZNF559-212ENST00000592896 DMRT2Q9Y5R5 561 aa14.96□□□□□ -0.01
ZNF559-212ENST00000592896 NISCHQ9Y2I1 1504 aa14.69□□□□□ -0.06
ZNF559-212ENST00000592896 CNKSR2Q8WXI2 1034 aa14.63□□□□□ -0.07
ZNF559-212ENST00000592896 HOXD11P31277 338 aaPredicted RBP14.48□□□□□ -0.09
ZNF559-212ENST00000592896 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
ZNF559-212ENST00000592896 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
ZNF559-212ENST00000592896 DCAF8L1A6NGE4 600 aa14.42□□□□□ -0.1
ZNF559-212ENST00000592896 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
ZNF559-212ENST00000592896 CACNB1Q02641 598 aaPredicted RBP14.28□□□□□ -0.12
ZNF559-212ENST00000592896 KCNA4P22459 653 aa14.26□□□□□ -0.13
ZNF559-212ENST00000592896 RNF39Q9H2S5 420 aa14.11□□□□□ -0.15
ZNF559-212ENST00000592896 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
ZNF559-212ENST00000592896 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
ZNF559-212ENST00000592896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.19
ZNF559-212ENST00000592896 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
ZNF559-212ENST00000592896 U3KPZ7 1027 aaPredicted RBP13.58□□□□□ -0.24
ZNF559-212ENST00000592896 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
ZNF559-212ENST00000592896 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
ZNF559-212ENST00000592896 CAPN15O75808 1086 aa13.3□□□□□ -0.28
ZNF559-212ENST00000592896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
ZNF559-212ENST00000592896 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
ZNF559-212ENST00000592896 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
ZNF559-212ENST00000592896 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
ZNF559-212ENST00000592896 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
ZNF559-212ENST00000592896 DSG3P32926 999 aa13.16□□□□□ -0.3
ZNF559-212ENST00000592896 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
ZNF559-212ENST00000592896 ZBTB22O15209 634 aa13.13□□□□□ -0.31
ZNF559-212ENST00000592896 APLP2Q06481 763 aa13.1□□□□□ -0.31
ZNF559-212ENST00000592896 ABCB7O75027 752 aa13.04□□□□□ -0.32
ZNF559-212ENST00000592896 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
ZNF559-212ENST00000592896 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
ZNF559-212ENST00000592896 POLA2Q14181 598 aa12.85□□□□□ -0.35
ZNF559-212ENST00000592896 POTEHQ6S545 545 aa12.82□□□□□ -0.36
ZNF559-212ENST00000592896 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
ZNF559-212ENST00000592896 EHMT2Q96KQ7 1210 aa12.71□□□□□ -0.38
ZNF559-212ENST00000592896 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
ZNF559-212ENST00000592896 CCDC180Q9P1Z9 1646 aa12.66□□□□□ -0.38
ZNF559-212ENST00000592896 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
ZNF559-212ENST00000592896 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
ZNF559-212ENST00000592896 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
ZNF559-212ENST00000592896 ZCCHC6Q5VYS8 1495 aaKnown RBP12.41□□□□□ -0.42
ZNF559-212ENST00000592896 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
ZNF559-212ENST00000592896 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
ZNF559-212ENST00000592896 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
ZNF559-212ENST00000592896 FBLN2P98095 1184 aa12.33□□□□□ -0.44
ZNF559-212ENST00000592896 AKT1S1Q96B36 256 aa12.27□□□□□ -0.44
ZNF559-212ENST00000592896 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
ZNF559-212ENST00000592896 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
ZNF559-212ENST00000592896 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
ZNF559-212ENST00000592896 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
ZNF559-212ENST00000592896 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
ZNF559-212ENST00000592896 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
ZNF559-212ENST00000592896 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
ZNF559-212ENST00000592896 PITPNM1O00562 1244 aa12.06□□□□□ -0.48
ZNF559-212ENST00000592896 SSUH2Q9Y2M2 353 aa12.03□□□□□ -0.48
ZNF559-212ENST00000592896 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
ZNF559-212ENST00000592896 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
ZNF559-212ENST00000592896 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
ZNF559-212ENST00000592896 PABPN1Q86U42 306 aaKnown RBP eCLIP11.95□□□□□ -0.5
ZNF559-212ENST00000592896 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
ZNF559-212ENST00000592896 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
ZNF559-212ENST00000592896 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
ZNF559-212ENST00000592896 SPDYE4A6NLX3 237 aa11.85□□□□□ -0.51
ZNF559-212ENST00000592896 HAX1O00165 279 aa11.83□□□□□ -0.52
ZNF559-212ENST00000592896 MYO15BQ96JP2 1530 aa11.82□□□□□ -0.52
ZNF559-212ENST00000592896 SCRIBQ14160 1630 aa11.77□□□□□ -0.53
ZNF559-212ENST00000592896 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
ZNF559-212ENST00000592896 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
ZNF559-212ENST00000592896 ABCC9O60706 1549 aa11.75□□□□□ -0.53
ZNF559-212ENST00000592896 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
ZNF559-212ENST00000592896 NACADO15069 1562 aa11.71□□□□□ -0.54
ZNF559-212ENST00000592896 EVX2Q03828 476 aa11.63□□□□□ -0.55
ZNF559-212ENST00000592896 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
ZNF559-212ENST00000592896 RB1CC1Q8TDY2 1594 aa11.56□□□□□ -0.56
ZNF559-212ENST00000592896 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
ZNF559-212ENST00000592896 PROM2Q8N271 834 aa11.54□□□□□ -0.56
ZNF559-212ENST00000592896 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
ZNF559-212ENST00000592896 FKBP8Q14318 412 aa11.52□□□□□ -0.56
ZNF559-212ENST00000592896 CREBZFQ9NS37 354 aa11.52□□□□□ -0.56
ZNF559-212ENST00000592896 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
ZNF559-212ENST00000592896 CECR2Q9BXF3 1484 aa11.42□□□□□ -0.58
ZNF559-212ENST00000592896 GABBR2O75899 941 aa11.39□□□□□ -0.59
ZNF559-212ENST00000592896 MROH2BQ7Z745 1585 aa11.39□□□□□ -0.59
ZNF559-212ENST00000592896 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
ZNF559-212ENST00000592896 UNC13AQ9UPW8 1703 aa11.37□□□□□ -0.59
ZNF559-212ENST00000592896 MNX1P50219 401 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms