RNA–Protein interactions for RNA: ENST00000604543.5

ZNF559-ZNF177-210, Transcript of ZNF559-ZNF177 readthrough, humanhuman

TSL 4

Gene ZNF559-ZNF177, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-ZNF177-210ENST00000604543 AEBP2Q6ZN18 517 aaPredicted RBP21.46■■□□□ 1.03
ZNF559-ZNF177-210ENST00000604543 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
ZNF559-ZNF177-210ENST00000604543 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
ZNF559-ZNF177-210ENST00000604543 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
ZNF559-ZNF177-210ENST00000604543 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
ZNF559-ZNF177-210ENST00000604543 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
ZNF559-ZNF177-210ENST00000604543 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
ZNF559-ZNF177-210ENST00000604543 FOXD1Q16676 465 aa16.91■□□□□ 0.3
ZNF559-ZNF177-210ENST00000604543 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
ZNF559-ZNF177-210ENST00000604543 ADRA2BP18089 450 aa16.35■□□□□ 0.21
ZNF559-ZNF177-210ENST00000604543 PPP6R1Q9UPN7 881 aa16.33■□□□□ 0.2
ZNF559-ZNF177-210ENST00000604543 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
ZNF559-ZNF177-210ENST00000604543 ABCC9O60706 1549 aa16.24■□□□□ 0.19
ZNF559-ZNF177-210ENST00000604543 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
ZNF559-ZNF177-210ENST00000604543 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
ZNF559-ZNF177-210ENST00000604543 NACADO15069 1562 aa16.06■□□□□ 0.16
ZNF559-ZNF177-210ENST00000604543 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
ZNF559-ZNF177-210ENST00000604543 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
ZNF559-ZNF177-210ENST00000604543 SHROOM4Q9ULL8 1493 aa15.81■□□□□ 0.12
ZNF559-ZNF177-210ENST00000604543 SCRIBQ14160 1630 aa15.68■□□□□ 0.1
ZNF559-ZNF177-210ENST00000604543 MSH5O43196 834 aa15.6■□□□□ 0.09
ZNF559-ZNF177-210ENST00000604543 UNC13AQ9UPW8 1703 aa15.5■□□□□ 0.07
ZNF559-ZNF177-210ENST00000604543 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
ZNF559-ZNF177-210ENST00000604543 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
ZNF559-ZNF177-210ENST00000604543 CECR2Q9BXF3 1484 aa15.23■□□□□ 0.03
ZNF559-ZNF177-210ENST00000604543 RSF1Q96T23 1441 aaPredicted RBP15.2■□□□□ 0.02
ZNF559-ZNF177-210ENST00000604543 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
ZNF559-ZNF177-210ENST00000604543 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
ZNF559-ZNF177-210ENST00000604543 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
ZNF559-ZNF177-210ENST00000604543 MROH2BQ7Z745 1585 aa15.14■□□□□ 0.01
ZNF559-ZNF177-210ENST00000604543 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
ZNF559-ZNF177-210ENST00000604543 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
ZNF559-ZNF177-210ENST00000604543 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
ZNF559-ZNF177-210ENST00000604543 WIZO95785 1651 aa14.97□□□□□ -0.01
ZNF559-ZNF177-210ENST00000604543 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
ZNF559-ZNF177-210ENST00000604543 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
ZNF559-ZNF177-210ENST00000604543 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
ZNF559-ZNF177-210ENST00000604543 KCNA4P22459 653 aa14.9□□□□□ -0.02
ZNF559-ZNF177-210ENST00000604543 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
ZNF559-ZNF177-210ENST00000604543 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
ZNF559-ZNF177-210ENST00000604543 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
ZNF559-ZNF177-210ENST00000604543 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
ZNF559-ZNF177-210ENST00000604543 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
ZNF559-ZNF177-210ENST00000604543 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
ZNF559-ZNF177-210ENST00000604543 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
ZNF559-ZNF177-210ENST00000604543 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
ZNF559-ZNF177-210ENST00000604543 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
ZNF559-ZNF177-210ENST00000604543 DMRT2Q9Y5R5 561 aa14.57□□□□□ -0.08
ZNF559-ZNF177-210ENST00000604543 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
ZNF559-ZNF177-210ENST00000604543 CFTRP13569 1480 aa14.45□□□□□ -0.1
ZNF559-ZNF177-210ENST00000604543 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
ZNF559-ZNF177-210ENST00000604543 CADPSQ9ULU8 1353 aa14.43□□□□□ -0.1
ZNF559-ZNF177-210ENST00000604543 RNF216Q9NWF9 866 aaPredicted RBP14.4□□□□□ -0.1
ZNF559-ZNF177-210ENST00000604543 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
ZNF559-ZNF177-210ENST00000604543 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
ZNF559-ZNF177-210ENST00000604543 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
ZNF559-ZNF177-210ENST00000604543 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
ZNF559-ZNF177-210ENST00000604543 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
ZNF559-ZNF177-210ENST00000604543 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
ZNF559-ZNF177-210ENST00000604543 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
ZNF559-ZNF177-210ENST00000604543 NESP48681 1621 aa14.23□□□□□ -0.13
ZNF559-ZNF177-210ENST00000604543 FANCD2Q9BXW9 1451 aa14.22□□□□□ -0.13
ZNF559-ZNF177-210ENST00000604543 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
ZNF559-ZNF177-210ENST00000604543 TOP2BQ02880 1626 aa14.19□□□□□ -0.14
ZNF559-ZNF177-210ENST00000604543 SYNJ1O43426 1573 aa14.19□□□□□ -0.14
ZNF559-ZNF177-210ENST00000604543 BIVM-ERCC5R4GMW8 1640 aa14.17□□□□□ -0.14
ZNF559-ZNF177-210ENST00000604543 CUX1P39880 1505 aa14.16□□□□□ -0.14
ZNF559-ZNF177-210ENST00000604543 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
ZNF559-ZNF177-210ENST00000604543 EEA1Q15075 1411 aa14.11□□□□□ -0.15
ZNF559-ZNF177-210ENST00000604543 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
ZNF559-ZNF177-210ENST00000604543 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
ZNF559-ZNF177-210ENST00000604543 SOGA1O94964 1423 aa14.05□□□□□ -0.16
ZNF559-ZNF177-210ENST00000604543 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
ZNF559-ZNF177-210ENST00000604543 URB2Q14146 1524 aaKnown RBP14.04□□□□□ -0.16
ZNF559-ZNF177-210ENST00000604543 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
ZNF559-ZNF177-210ENST00000604543 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
ZNF559-ZNF177-210ENST00000604543 MRC2Q9UBG0 1479 aa14.01□□□□□ -0.17
ZNF559-ZNF177-210ENST00000604543 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
ZNF559-ZNF177-210ENST00000604543 FAM9AQ8IZU1 332 aaPredicted RBP14.01□□□□□ -0.17
ZNF559-ZNF177-210ENST00000604543 CSRNP3Q8WYN3 585 aa14□□□□□ -0.17
ZNF559-ZNF177-210ENST00000604543 RUSC2Q8N2Y8 1516 aa13.99□□□□□ -0.17
ZNF559-ZNF177-210ENST00000604543 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
ZNF559-ZNF177-210ENST00000604543 KIF27Q86VH2 1401 aa13.97□□□□□ -0.17
ZNF559-ZNF177-210ENST00000604543 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
ZNF559-ZNF177-210ENST00000604543 ERCC6Q03468 1493 aa13.95□□□□□ -0.18
ZNF559-ZNF177-210ENST00000604543 WDR62O43379 1518 aa13.95□□□□□ -0.18
ZNF559-ZNF177-210ENST00000604543 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
ZNF559-ZNF177-210ENST00000604543 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
ZNF559-ZNF177-210ENST00000604543 CUX2O14529 1486 aa13.91□□□□□ -0.18
ZNF559-ZNF177-210ENST00000604543 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
ZNF559-ZNF177-210ENST00000604543 THOC2Q8NI27 1593 aaKnown RBP13.88□□□□□ -0.19
ZNF559-ZNF177-210ENST00000604543 IGF1RP08069 1367 aa13.87□□□□□ -0.19
ZNF559-ZNF177-210ENST00000604543 KIF21BO75037 1637 aa13.86□□□□□ -0.19
ZNF559-ZNF177-210ENST00000604543 PRXQ9BXM0 1461 aa13.86□□□□□ -0.19
ZNF559-ZNF177-210ENST00000604543 WDR97A6NE52 1622 aa13.85□□□□□ -0.19
ZNF559-ZNF177-210ENST00000604543 TARBP1Q13395 1621 aaKnown RBP13.85□□□□□ -0.19
ZNF559-ZNF177-210ENST00000604543 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
ZNF559-ZNF177-210ENST00000604543 GOLGA3Q08378 1498 aa13.84□□□□□ -0.19
ZNF559-ZNF177-210ENST00000604543 TNIKQ9UKE5 1360 aa13.82□□□□□ -0.2
ZNF559-ZNF177-210ENST00000604543 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms