Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 AC093827.2-201ENST00000512654 315 ntBASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKIPSDQ9NZQ3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 FP700111.2-201ENST00000619190 1892 ntBASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKIPSDQ9NZQ3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 PRORSD1P-201ENST00000295112 541 ntBASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCKIPSDQ9NZQ3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 AC011484.1-201ENST00000377652 1995 ntBASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKIPSDQ9NZQ3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKIPSDQ9NZQ3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms