Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDF3Q9NR23 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.2■□□□□ 0.98
GDF3Q9NR23 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GDF3Q9NR23 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.2■□□□□ 0.98
GDF3Q9NR23 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GDF3Q9NR23 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.2■□□□□ 0.98
GDF3Q9NR23 MYCNOS-205ENST00000641950 531 ntBASIC21.2■□□□□ 0.98
GDF3Q9NR23 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDF3Q9NR23 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.2■□□□□ 0.98
GDF3Q9NR23 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDF3Q9NR23 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.2■□□□□ 0.98
GDF3Q9NR23 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GDF3Q9NR23 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GDF3Q9NR23 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDF3Q9NR23 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDF3Q9NR23 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDF3Q9NR23 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.19■□□□□ 0.98
GDF3Q9NR23 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.19■□□□□ 0.98
GDF3Q9NR23 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
GDF3Q9NR23 DUX4L16-201ENST00000555130 1264 ntBASIC21.19■□□□□ 0.98
GDF3Q9NR23 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.19■□□□□ 0.98
GDF3Q9NR23 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDF3Q9NR23 AP000974.1-201ENST00000623909 2387 ntBASIC21.19■□□□□ 0.98
GDF3Q9NR23 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.19■□□□□ 0.98
GDF3Q9NR23 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GDF3Q9NR23 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDF3Q9NR23 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GDF3Q9NR23 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GDF3Q9NR23 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.19■□□□□ 0.98
GDF3Q9NR23 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
GDF3Q9NR23 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GDF3Q9NR23 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GDF3Q9NR23 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GDF3Q9NR23 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GDF3Q9NR23 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GDF3Q9NR23 AC005181.1-201ENST00000604782 1256 ntBASIC21.18■□□□□ 0.98
GDF3Q9NR23 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
GDF3Q9NR23 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GDF3Q9NR23 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GDF3Q9NR23 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 AC083906.2-201ENST00000511578 360 ntBASIC21.17■□□□□ 0.98
GDF3Q9NR23 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 AL050303.2-201ENST00000619798 666 ntBASIC21.17■□□□□ 0.98
GDF3Q9NR23 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GDF3Q9NR23 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GDF3Q9NR23 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
GDF3Q9NR23 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.17■□□□□ 0.98
GDF3Q9NR23 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
GDF3Q9NR23 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
GDF3Q9NR23 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 TNXA-203ENST00000507684 2038 ntBASIC21.16■□□□□ 0.98
GDF3Q9NR23 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.16■□□□□ 0.98
GDF3Q9NR23 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
GDF3Q9NR23 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.16■□□□□ 0.98
GDF3Q9NR23 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
GDF3Q9NR23 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.16■□□□□ 0.98
GDF3Q9NR23 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.16■□□□□ 0.98
GDF3Q9NR23 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
GDF3Q9NR23 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GDF3Q9NR23 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.15■□□□□ 0.98
GDF3Q9NR23 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF3Q9NR23 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.15■□□□□ 0.98
GDF3Q9NR23 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.15■□□□□ 0.98
GDF3Q9NR23 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.15■□□□□ 0.98
GDF3Q9NR23 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GDF3Q9NR23 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.15■□□□□ 0.98
GDF3Q9NR23 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF3Q9NR23 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.15■□□□□ 0.98
GDF3Q9NR23 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF3Q9NR23 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF3Q9NR23 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF3Q9NR23 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF3Q9NR23 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
GDF3Q9NR23 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
GDF3Q9NR23 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF3Q9NR23 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF3Q9NR23 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
GDF3Q9NR23 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF3Q9NR23 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms