Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
C12orf4Q9NQ89 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
C12orf4Q9NQ89 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
C12orf4Q9NQ89 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
C12orf4Q9NQ89 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 AC053503.5-201ENST00000601508 636 ntBASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 AC011270.2-201ENST00000624293 2550 ntBASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf4Q9NQ89 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 AP004607.4-201ENST00000530158 1459 ntBASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 FP700111.2-201ENST00000619190 1892 ntBASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 MIR572-201ENST00000384983 95 ntBASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 AC011484.1-201ENST00000377652 1995 ntBASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf4Q9NQ89 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 EDA-201ENST00000338901 1233 ntBASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 AP001330.3-201ENST00000520123 633 ntBASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 EEF1DP3-203ENST00000566025 782 ntBASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 AC131212.1-201ENST00000613771 668 ntBASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 SMG8-203ENST00000578922 2178 ntBASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.37■□□□□ 0.37
C12orf4Q9NQ89 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C12orf4Q9NQ89 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms