Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTRA1Q92743 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTRA1Q92743 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTRA1Q92743 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.5■□□□□ 0.55
HTRA1Q92743 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTRA1Q92743 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.5■□□□□ 0.55
HTRA1Q92743 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HTRA1Q92743 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HTRA1Q92743 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HTRA1Q92743 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTRA1Q92743 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTRA1Q92743 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTRA1Q92743 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTRA1Q92743 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.49■□□□□ 0.55
HTRA1Q92743 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.49■□□□□ 0.55
HTRA1Q92743 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.49■□□□□ 0.55
HTRA1Q92743 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.49■□□□□ 0.55
HTRA1Q92743 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.49■□□□□ 0.55
HTRA1Q92743 AC053503.5-201ENST00000601508 636 ntBASIC18.49■□□□□ 0.55
HTRA1Q92743 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTRA1Q92743 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTRA1Q92743 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
HTRA1Q92743 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HTRA1Q92743 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.48■□□□□ 0.55
HTRA1Q92743 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.48■□□□□ 0.55
HTRA1Q92743 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HTRA1Q92743 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.48■□□□□ 0.55
HTRA1Q92743 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.48■□□□□ 0.55
HTRA1Q92743 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.48■□□□□ 0.55
HTRA1Q92743 AC137761.2-201ENST00000561729 223 ntBASIC18.48■□□□□ 0.55
HTRA1Q92743 AC145350.3-201ENST00000569033 163 ntBASIC18.48■□□□□ 0.55
HTRA1Q92743 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.48■□□□□ 0.55
HTRA1Q92743 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HTRA1Q92743 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTRA1Q92743 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.48■□□□□ 0.55
HTRA1Q92743 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.47■□□□□ 0.55
HTRA1Q92743 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.47■□□□□ 0.55
HTRA1Q92743 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 AP004607.4-201ENST00000530158 1459 ntBASIC18.47■□□□□ 0.55
HTRA1Q92743 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HTRA1Q92743 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.47■□□□□ 0.55
HTRA1Q92743 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 AC016769.1-201ENST00000409132 1010 ntBASIC18.47■□□□□ 0.55
HTRA1Q92743 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HTRA1Q92743 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.47■□□□□ 0.55
HTRA1Q92743 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HTRA1Q92743 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HTRA1Q92743 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTRA1Q92743 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
HTRA1Q92743 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 AP000974.1-201ENST00000623909 2387 ntBASIC18.46■□□□□ 0.55
HTRA1Q92743 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 AC116562.4-201ENST00000641316 2276 ntBASIC18.46■□□□□ 0.55
HTRA1Q92743 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.46■□□□□ 0.55
HTRA1Q92743 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.46■□□□□ 0.55
HTRA1Q92743 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.46■□□□□ 0.55
HTRA1Q92743 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.46■□□□□ 0.55
HTRA1Q92743 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.46■□□□□ 0.55
HTRA1Q92743 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HTRA1Q92743 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HTRA1Q92743 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTRA1Q92743 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HTRA1Q92743 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.46■□□□□ 0.54
HTRA1Q92743 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HTRA1Q92743 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTRA1Q92743 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.45■□□□□ 0.54
HTRA1Q92743 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.45■□□□□ 0.54
HTRA1Q92743 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms